ggKbase home page

13_2_20cm_scaffold_3130

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3130_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(1..921)
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C5R5_BEUC1
Mov34/MPN/PAD-1 family protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_2_20cm_scaffold_3130_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(955..1920)
DNA (966bp) protein (322aa)
threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E2_GEMAT
13_2_20cm_scaffold_3130_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1989..2924)
DNA (936bp) protein (312aa)
tRNA-processing ribonuclease BN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E1_GEMAT
membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribonuclease BN
13_2_20cm_scaffold_3130_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3105..4481)
DNA (1377bp) protein (459aa)
Putative fructose-bisphosphate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D9_GEMAT
putative fructose-bisphosphate aldolase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative fructose-bisphosphate aldolase
13_2_20cm_scaffold_3130_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4505..5107)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D7_GEMAT
hypothetical protein; K06167 PhnP protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_3130_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5167..6639)
DNA (1473bp) protein (491aa)
pykA; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RBG_16_Gemmatimonadetes_66_8_curated
pykA; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D6_GEMAT
13_2_20cm_scaffold_3130_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6636..7415)
DNA (780bp) protein (260aa)
silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NAD-dependent protein deacylase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FE61_VERMA
silent information regulator protein Sir2
13_2_20cm_scaffold_3130_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7429..7890)
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RRL2_LEIAQ
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ERK71209.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14
marR family protein
13_2_20cm_scaffold_3130_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7984..8703
DNA (720bp) protein (240aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A524_GEMAT rbh
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH37334.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
13_2_20cm_scaffold_3130_10
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8700..10430
DNA (1731bp) protein (577aa)
Putative ABC transporter, permease protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSU1_OPITP
ABC transporter permease {ECO:0000313|EMBL:KFA93892.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="C
ABC transporter permease
13_2_20cm_scaffold_3130_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10427..10816)
DNA (390bp) protein (130aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_3130_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

10843..11421
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDG1_NAKMY
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein
13_2_20cm_scaffold_3130_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11445..11834)
DNA (390bp) protein (130aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_3130_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11960..13021)
DNA (1062bp) protein (354aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate semialdehyde dehydrogenase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF1_CHLTF rbh
13_2_20cm_scaffold_3130_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13191..13808
DNA (618bp) protein (206aa)
aspartokinase/homoserine dehydrogenase (EC:1.1.1.3 2.7.2.4)
Aspartokinase/homoserine dehydrogenase {ECO:0000313|EMBL:BAH38409.1}; EC=1.1.1.3 {ECO:0000313|EMBL:BAH38409.1};; EC=2.7.2.4 {ECO:0000313|EMBL:BAH38409.1};; TaxID=379066 species="Bacteria; Gemmatimonad
Aspartokinase/homoserine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A849_GEMAT
Displaying 15 items

View Taxonomy