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13_2_20cm_scaffold_339

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_339_1
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..653)
DNA (651bp) protein (217aa)
Radical SAM domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T982_NIAKG
radical SAM protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
Elongator protein 3/MiaB/NifB
13_2_20cm_scaffold_339_2
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(739..1374)
DNA (636bp) protein (212aa)
LuxR family two component transcriptional regulator Tax=RBG_16_Zixibacteria_53_22_curated
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain id=4707568 bin=GWC2_Ignavibacteria_38_9 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
two component system response regulator
13_2_20cm_scaffold_339_3
unknown

Not on your lists

1711..1983
DNA (273bp) protein (91aa)

This feature has no annotations

13_2_20cm_scaffold_339_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1999..3456)
DNA (1458bp) protein (486aa)
Protein of unknown function DUF2329
Uncharacterized protein {ECO:0000313|EMBL:AHG89210.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=24457720 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_2_20cm_scaffold_339_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3453..6473)
DNA (3021bp) protein (1007aa)
OmpA-related protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QH43_9DELT
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG89209.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_339_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6602..8824
DNA (2223bp) protein (741aa)
Beta-glucosidase-like glycosyl hydrolase {ECO:0000313|EMBL:CDM64118.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CDM64118.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomo
beta-glucosidase (EC:3.2.1.21)
Glycoside hydrolase family 3 protein id=2725679 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome rbh
13_2_20cm_scaffold_339_7
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9370..9783)
DNA (414bp) protein (138aa)
Transposase IS200 like family protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QC26_9CYAN
Transposase IS200 like family protein {ECO:0000313|EMBL:ERT04575.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;
transposase IS200-family protein
13_2_20cm_scaffold_339_8
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10144..11697
DNA (1554bp) protein (518aa)
ligB; ATP-dependent DNA ligase (EC:6.5.1.1)
Probable DNA ligase {ECO:0000255|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000255|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000255|HAMAP-Rule:MF_00407}; TaxID=290397 species="Ba
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003640147
13_2_20cm_scaffold_339_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11772..12473
DNA (702bp) protein (234aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=14428812 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_339_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12482..14155)
DNA (1674bp) protein (558aa)
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10 rbh
diguanylate cyclase Tax=CSP1_5_NC10
diguanylate cyclase
13_2_20cm_scaffold_339_11
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14157..14669)
DNA (513bp) protein (171aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein id=12556247 bin=CNBR_ACIDO species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DinB family protein
13_2_20cm_scaffold_339_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14784..15344
DNA (561bp) protein (187aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00037CE4D6
Peptide methionine sulfoxide reductase msrB
13_2_20cm_scaffold_339_13
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

15374..17032
DNA (1659bp) protein (553aa)
Amidotransferase-related protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PGG0_9DELT
gatA2; amidase Tax=RBG_13_Acidobacteria_68_16_curated
amidase
13_2_20cm_scaffold_339_14
unknown

Not on your lists

comp(17042..17593)
DNA (552bp) protein (184aa)

This feature has no annotations

13_2_20cm_scaffold_339_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17783..18139
DNA (357bp) protein (119aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PP0_SOLUE
cupin domain protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cupin 2 conserved barrel domain protein
13_2_20cm_scaffold_339_16
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(18121..19251)
DNA (1131bp) protein (377aa)
Gll3435 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFT9_GLOVI
hypothetical protein; K00479 Rieske 2Fe-2S family protein Tax=RBG_16_Chloroflexi_54_18_curated
hypothetical protein
13_2_20cm_scaffold_339_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19397..20590)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036629FB
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG88245.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 17 items

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