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13_2_20cm_scaffold_492

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_492_1
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..874)
DNA (873bp) protein (291aa)
Ppx/GppA phosphatase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A0I0_9PLAN
Exopolyphosphatase {ECO:0000313|EMBL:KIE41594.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
gppA-2; pppGpp 5'-phosphohydrolase and exopolyphosphatase, HD domain-containing
13_2_20cm_scaffold_492_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1038..1847
DNA (810bp) protein (270aa)
polyphosphate:AMP phosphotransferase (EC:2.7.4.-)
Polyphosphate:AMP phosphotransferase {ECO:0000313|EMBL:ABJ82079.1}; EC=2.7.4.- {ECO:0000313|EMBL:ABJ82079.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacterac
hypothetical protein n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255913C
13_2_20cm_scaffold_492_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1884..3623)
DNA (1740bp) protein (580aa)
phoR; phosphate regulon sensor protein PhoR; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curat
Phosphate regulon sensor protein PhoR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ6_GEMAT
phoR; phosphate regulon sensor protein PhoR
13_2_20cm_scaffold_492_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3620..4360)
DNA (741bp) protein (247aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ5_GEMAT
phoB; phosphate regulon transcriptional regulatory protein PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curat
phoB; phosphate regulon transcriptional regulatory protein PhoB
13_2_20cm_scaffold_492_5
unknown

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comp(4357..4632)
DNA (276bp) protein (92aa)

This feature has no annotations

13_2_20cm_scaffold_492_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4724..7897
DNA (3174bp) protein (1058aa)
cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16)
2',3'-cyclic-nucleotide 2'-phosphodiesterase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ3_GEMAT rbh
13_2_20cm_scaffold_492_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7894..9135
DNA (1242bp) protein (414aa)
cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (EC:3.1.4.16) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Adenosine deaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ1_GEMAT
adenosine deaminase
13_2_20cm_scaffold_492_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9136..10539
DNA (1404bp) protein (468aa)
Na+ dependent nucleoside transporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM43_KORVE
Na+ dependent nucleoside transporter; K03317 concentrative nucleoside transporter, CNT family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Na+ dependent nucleoside transporter
13_2_20cm_scaffold_492_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10536..11372
DNA (837bp) protein (279aa)
punA; purine nucleoside phosphorylase (EC:2.4.2.1); K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
punA; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ0_GEMAT
13_2_20cm_scaffold_492_10
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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11524..14181
DNA (2658bp) protein (886aa)
membrane associated hydrolase Tax=GWC2_Ignavibacteria_rel_36_12_curated
Putative membrane associated hydrolase id=4183989 bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
membrane associated hydrolase
13_2_20cm_scaffold_492_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(14159..14626)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B7F
Uncharacterized protein {ECO:0000313|EMBL:ELZ35110.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
13_2_20cm_scaffold_492_12
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14610..14846)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CEI7_MYXFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI66058.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
13_2_20cm_scaffold_492_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14836..15645)
DNA (810bp) protein (270aa)
phosphomethylpyrimidine kinase n=1 Tax=Meiothermus timidus RepID=UPI000377A00C
phosphomethylpyrimidine kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphomethylpyrimidine kinase ThiD
13_2_20cm_scaffold_492_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15662..16258)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI0003820910
Uncharacterized protein {ECO:0000313|EMBL:AKF02926.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
peptidase M48 Ste24p
13_2_20cm_scaffold_492_15
unknown

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comp(16255..16449)
DNA (195bp) protein (65aa)

This feature has no annotations

13_2_20cm_scaffold_492_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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17448..17885
DNA (438bp) protein (146aa)
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68
pilD; leader peptidase/N-methyltransferase (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY7_GEMAT
Displaying 16 items

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