ggKbase home page

13_2_20cm_scaffold_5448

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5448_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..1543
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031DFAC0
peptidase M28 Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M28
13_2_20cm_scaffold_5448_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1526..1999)
DNA (474bp) protein (158aa)
Glyoxalase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBI4_9RHIZ
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AHB47390.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans N
13_2_20cm_scaffold_5448_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

2107..3720
DNA (1614bp) protein (538aa)
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEY1_RHOMR
13_2_20cm_scaffold_5448_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

3717..4319
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YKB3_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
13_2_20cm_scaffold_5448_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(4379..4555)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XPD1_9BACT id=73381 bin=ACD51 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_2_20cm_scaffold_5448_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

5089..6615
DNA (1527bp) protein (509aa)
hypothetical protein; K06888 id=24560588 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein; K06888 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_5448_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6963..7199
DNA (237bp) protein (79aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH37516.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantia
13_2_20cm_scaffold_5448_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7196..7807
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI000375EB3A
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycoside hydrolase family 13 protein
13_2_20cm_scaffold_5448_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7804..8472
DNA (669bp) protein (223aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_5448_10
unknown

Not on your lists

8610..8825
DNA (216bp) protein (72aa)

This feature has no annotations

13_2_20cm_scaffold_5448_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8826..10079)
DNA (1254bp) protein (418aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_
rca:Rcas_3355 arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] id=1246557 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi rbh
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
13_2_20cm_scaffold_5448_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10166..10807
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA53_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetratricopeptide TPR_1 repeat-containing protein
13_2_20cm_scaffold_5448_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10788..11222
DNA (435bp) protein (145aa)
Tetratricopeptide TPR_1 repeat-containing protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 13 items

View Taxonomy