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13_2_20cm_scaffold_6171

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6171_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1..1119)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4F9_GEMAT
hypothetical protein; K03641 TolB protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
WD40-like beta Propeller containing protein
13_2_20cm_scaffold_6171_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1155..1841)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G0_GEMAT
Putative periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB domain-containing protein
13_2_20cm_scaffold_6171_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1838..2275)
DNA (438bp) protein (146aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G1_GEMAT
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=RBG_16_Gemmatimonadetes_66_8_curated
Biopolymer transport protein ExbD/TolR
13_2_20cm_scaffold_6171_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2275..3012)
DNA (738bp) protein (246aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G2_GEMAT
putative biopolymer transport protein; K03562 biopolymer transport protein TolQ Tax=RBG_16_Gemmatimonadetes_66_8_curated
MotA/TolQ/ExbB proton channel
13_2_20cm_scaffold_6171_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(3049..4032)
DNA (984bp) protein (328aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase id=4952052 bin=GWC2_Chloroflexi_73_18 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
UDP-glucose-4-epimerase Tax=GWC2_RIF_CHLX_73_18_curated
13_2_20cm_scaffold_6171_6
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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comp(4022..5284)
DNA (1263bp) protein (421aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R7U1_AMMDK
Tax=BJP_IG2102_Coriobacteriales_64_17
13_2_20cm_scaffold_6171_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5301..6089)
DNA (789bp) protein (263aa)
cytochrome c biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cytochrome c assembly protein id=3366873 bin=GWC2_Methylomirabilis_70_16 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_6171_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6130..7428)
DNA (1299bp) protein (433aa)
LysM domain-containing protein id=7200269 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
uncharacterized protein containing LysM domain
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_6171_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7400..7903)
DNA (504bp) protein (168aa)
Single-stranded DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4G5_GEMAT
ssb; single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
single-strand binding protein
13_2_20cm_scaffold_6171_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7998..8468)
DNA (471bp) protein (157aa)
30S ribosomal protein S18 (EC:2.3.1.-); K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7N6U1_9FIRM
ribosomal-protein-alanine acetyltransferase
13_2_20cm_scaffold_6171_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8428..9168)
DNA (741bp) protein (247aa)
Universal bacterial protein YeaZ n=1 Tax=Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28) RepID=C9LXB6_SELS3
peptidase M22 glycoprotease Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
universal protein YeaZ
13_2_20cm_scaffold_6171_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9168..9587)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BBT5_9GAMM
putative protein family UPF0079, ATPase
Uncharacterized protein {ECO:0000313|EMBL:AHG91097.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_6171_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9538..11562)
DNA (2025bp) protein (675aa)
UvrABC system protein B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRB_GEMAT
uvrB; UvrABC system protein B; K03702 excinuclease ABC subunit B Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
uvrB; UvrABC system protein B
13_2_20cm_scaffold_6171_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11573..12718)
DNA (1146bp) protein (382aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
GTP pyrophosphokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H2_GEMAT
RelA/SpoT family protein
Displaying 14 items

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