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13_2_20cm_scaffold_6215

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6215_1
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..874
DNA (873bp) protein (291aa)
Acriflavin resistance protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJ86_DESAR
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AEB09258.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobac
13_2_20cm_scaffold_6215_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(825..1070)
DNA (246bp) protein (82aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000375FE96
13_2_20cm_scaffold_6215_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1055..1951)
DNA (897bp) protein (299aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=24433501 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
13_2_20cm_scaffold_6215_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2063..2578)
DNA (516bp) protein (172aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI9_RHOM4
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACY48647.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
13_2_20cm_scaffold_6215_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2868..4487)
DNA (1620bp) protein (540aa)
RagB/SusD domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QPC1_SPILD
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ADB39429.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 339
13_2_20cm_scaffold_6215_6
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4504..5757)
DNA (1254bp) protein (418aa)
TonB-dependent receptor plug n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDT4_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH52058.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
13_2_20cm_scaffold_6215_7
unknown

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5814..6089
DNA (276bp) protein (92aa)

This feature has no annotations

13_2_20cm_scaffold_6215_8
unknown

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6123..6377
DNA (255bp) protein (85aa)

This feature has no annotations

13_2_20cm_scaffold_6215_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(6478..7794)
DNA (1317bp) protein (439aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG52_RHOMR
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEN72952.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
13_2_20cm_scaffold_6215_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7810..8865)
DNA (1056bp) protein (352aa)
Anti-FecI sigma factor, FecR n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHL0_RHOM4
FecR protein
FecR protein {ECO:0000313|EMBL:AHG89922.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_6215_11
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8919..9521)
DNA (603bp) protein (201aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAJ5_GEMAT
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_13_Bacteroidetes_43_22_curated
RNA polymerase sigma-70 factor
13_2_20cm_scaffold_6215_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9686..11521)
DNA (1836bp) protein (612aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B7E9B
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_6215_13
unknown

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comp(11551..12003)
DNA (453bp) protein (151aa)

This feature has no annotations

Displaying 13 items

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