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13_2_20cm_scaffold_658

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_658_1
unknown

Not on your lists

comp(106..375)
DNA (270bp) protein (90aa)

This feature has no annotations

13_2_20cm_scaffold_658_2
unknown

Not on your lists

comp(375..647)
DNA (273bp) protein (91aa)

This feature has no annotations

13_2_20cm_scaffold_658_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(647..934)
DNA (288bp) protein (96aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_658_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(960..2891)
DNA (1932bp) protein (644aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L0_GEMAT
uvrA; UvrABC system protein A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UvrABC system protein A
13_2_20cm_scaffold_658_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2920..3684)
DNA (765bp) protein (255aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6L0_GEMAT
uvrA; UvrABC system protein A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UvrABC system protein A
13_2_20cm_scaffold_658_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3857..4180
DNA (324bp) protein (108aa)
CutA1 divalent ion tolerance protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H9J2_ANADF
Divalent-cation tolerance protein CutA; K03926 periplasmic divalent cation tolerance protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CutA1 divalent ion tolerance protein
13_2_20cm_scaffold_658_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4177..4782
DNA (606bp) protein (202aa)
Tetratricopeptide repeat protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHA3_METFS
SPY protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
GTP cyclohydrolase III (methanopterin)
13_2_20cm_scaffold_658_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4779..5294
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WM42_MYCKA
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_658_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

5291..6838
DNA (1548bp) protein (516aa)
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Transglutaminase-like protein id=2535659 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
putative transglutaminase protein
13_2_20cm_scaffold_658_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6835..7605
DNA (771bp) protein (257aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K8_GEMAT rbh
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative ABC transporter ATP-binding protein
13_2_20cm_scaffold_658_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7602..9293
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K7_GEMAT
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_658_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9290..9775)
DNA (486bp) protein (162aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_658_13
Fenneropenaeus chinensis, Fenneropenaeus, Decapoda, Eumalacostraca, Arthropoda, Metazoa

Not on your lists

9908..12223
DNA (2316bp) protein (772aa)
Trehalose-6-phosphate synthase {ECO:0000313|EMBL:ACD74843.1}; EC=2.4.1.15 {ECO:0000313|EMBL:ACD74843.1};; TaxID=139456 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Malacostraca; Euma
Trehalose-6-phosphate synthase n=1 Tax=Fenneropenaeus chinensis RepID=G8XQS8_FENCH rbh
glycosyl transferase family 1
13_2_20cm_scaffold_658_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12231..12758)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K4_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_658_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12764..13390)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K3_GEMAT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cytochrome C biogenesis protein
13_2_20cm_scaffold_658_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13387..15417)
DNA (2031bp) protein (677aa)
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K2_GEMAT rbh
ccmF; cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c assembly protein
13_2_20cm_scaffold_658_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15418..15822)
DNA (405bp) protein (135aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K1_GEMAT
ccmE; cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CcmE/CycJ protein
13_2_20cm_scaffold_658_18

Not on your lists

comp(15829..16308)
DNA (480bp) protein (160aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5SIR4_9ZZZZ
Hypothetical conserved protein {ECO:0000313|EMBL:BAL56050.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
hypothetical protein
13_2_20cm_scaffold_658_19
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16308..17156)
DNA (849bp) protein (283aa)
Methylthioribose-1-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000255|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000255|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:00
Methylthioribose-1-phosphate isomerase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=MTNA_PELTS
translation initiation factor 2B subunit
13_2_20cm_scaffold_658_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17387..18169
DNA (783bp) protein (261aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T70_SOLUE
13_2_20cm_scaffold_658_21
unknown

Not on your lists

18166..18543
DNA (378bp) protein (126aa)

This feature has no annotations

13_2_20cm_scaffold_658_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

18589..18960
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF721
13_2_20cm_scaffold_658_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18967..20934
DNA (1968bp) protein (656aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6J5_GEMAT rbh
13_2_20cm_scaffold_658_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20891..22258)
DNA (1368bp) protein (456aa)
pdp; pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:BAH37835.1}; EC=2.4.2.2 {ECO:0000313|EMBL:BAH37835.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gem
Pyrimidine-nucleoside phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H5_GEMAT
13_2_20cm_scaffold_658_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22285..23082
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6H4_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_658_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23079..24443)
DNA (1365bp) protein (455aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJB6_CHLTF
13_2_20cm_scaffold_658_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24530..25291
DNA (762bp) protein (254aa)
Sensor histidine kinase/response regulator n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D3G7_MYXXD
sensor histidine kinase/response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
sensor histidine kinase/response regulator
13_2_20cm_scaffold_658_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25288..27834
DNA (2547bp) protein (849aa)
ligA; NAD(+)-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
DNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DNLJ_GEMAT
DNA ligase
13_2_20cm_scaffold_658_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27839..29197)
DNA (1359bp) protein (453aa)
peptidase U62 modulator of DNA gyrase; K03592 PmbA protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase U62, modulator of DNA gyrase id=2037492 bin=GWB2_Chloroflexi_49_20 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
peptidase U62 modulator of DNA gyrase
13_2_20cm_scaffold_658_30
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(29194..30579)
DNA (1386bp) protein (462aa)
Peptidase id=2037494 bin=GWB2_Chloroflexi_49_20 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good rbh
peptidase U62 modulator of DNA gyrase; K03568 TldD protein Tax=GWC2_Chloroflexi_49_37_curated
peptidase U62 modulator of DNA gyrase
Displaying items 1-30 of 31 in total

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