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13_2_20cm_scaffold_800

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_800_1
unknown

Not on your lists

comp(3..125)
DNA (123bp) protein (41aa)

This feature has no annotations

13_2_20cm_scaffold_800_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(275..706)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035E6308
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AHG91609.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_800_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(688..2427)
DNA (1740bp) protein (580aa)
Methanol dehydrogenase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FT20_9RHIZ
PQQ-dependent dehydrogenase, methanol/ethanol family
PQQ-dependent dehydrogenase, methanol/ethanol family {ECO:0000313|EMBL:AHG91607.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_800_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(2441..3079)
DNA (639bp) protein (213aa)
nucleoside-triphosphatase rdgB (EC:3.6.1.15); K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Non-canonical purine NTP pyrophosphatase n=1 Tax=Halomonas sp. PBN3 RepID=U7NT95_9GAMM
Nucleoside-triphosphatase rdgB
13_2_20cm_scaffold_800_5

Not on your lists

comp(3076..3486)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 293 RepID=E3T602_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC35746.1}; TaxID=698389 species="Bacteria; environmental samples.;" source="uncultured bacterium 293.;"
D-heptose-7-phosphate 1-kinase,D-heptose-1-phosphate adenylyltransferase
13_2_20cm_scaffold_800_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3564..3947)
DNA (384bp) protein (128aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_800_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3941..4459)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q1_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Rare lipoprotein B
13_2_20cm_scaffold_800_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4404..5093)
DNA (690bp) protein (230aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_800_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5123..7984)
DNA (2862bp) protein (954aa)
Surface antigen (D15) n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRH5_9BACT rbh
WD40 domain protein beta Propeller Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
WD40 domain protein beta Propeller
13_2_20cm_scaffold_800_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7989..10052)
DNA (2064bp) protein (688aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidyl-prolyl cis-trans isomerase id=12556596 bin=CNBR_ACIDO species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidyl-prolyl cis-trans isomerase
13_2_20cm_scaffold_800_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10006..10422)
DNA (417bp) protein (139aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DA38_9BACL
4-hydroxybenzoyl-CoA thioesterase
13_2_20cm_scaffold_800_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10483..11211
DNA (729bp) protein (243aa)
metallophosphoesterase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
metallophosphoesterase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] id=7200380 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Calcineurin-like phosphoesterase superfamily domain protein
13_2_20cm_scaffold_800_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11242..12039)
DNA (798bp) protein (266aa)
glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamate racemase
Glutamate racemase id=3490282 bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
13_2_20cm_scaffold_800_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12043..12552)
DNA (510bp) protein (170aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_800_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12549..13373)
DNA (825bp) protein (275aa)
Diacylglycerol kinase catalytic region n=2 Tax=Chloroflexus RepID=A9WJK5_CHLAA
diacylglycerol kinase catalytic subunit; K07029 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
diacylglycerol kinase catalytic subunit
13_2_20cm_scaffold_800_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13467..13823)
DNA (357bp) protein (119aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_scaffold_800_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14005..14382)
DNA (378bp) protein (126aa)
Putative pilin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H6_GEMAT
putative pilin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
African swine fever virus j13L
13_2_20cm_scaffold_800_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14577..14969)
DNA (393bp) protein (131aa)
Endoribonuclease L-PSP n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6X0B4_NITSE
endoribonuclease l-psp; K07567 TdcF protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
endoribonuclease l-psp
13_2_20cm_scaffold_800_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14969..16651)
DNA (1683bp) protein (561aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE57_GEMAT
13_2_20cm_scaffold_800_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(16648..17436)
DNA (789bp) protein (263aa)
putative DNase (EC:3.1.21.-); K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
UPI0003CFE5C6 related cluster n=1 Tax=unknown RepID=UPI0003CFE5C6
hydrolase, TatD family
13_2_20cm_scaffold_800_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17438..18451)
DNA (1014bp) protein (338aa)
Protein translocase subunit SecF n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECF_GEMAT
secF; protein-export membrane protein SecF
Protein translocase subunit SecF; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM
13_2_20cm_scaffold_800_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18453..20123)
DNA (1671bp) protein (557aa)
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
SecD export membrane protein
13_2_20cm_scaffold_800_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20130..21041)
DNA (912bp) protein (304aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=861299 species="Bacteria; Gemmatimonad
Riboflavin kinase/FMN adenylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P1_GEMAT
riboflavin biosynthesis protein RibF
13_2_20cm_scaffold_800_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21038..21880)
DNA (843bp) protein (281aa)
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=12555519 bin=CNBR_ACIDO species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s
tRNA pseudouridine synthase B
13_2_20cm_scaffold_800_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21889..22266)
DNA (378bp) protein (126aa)
Ribosome-binding factor A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RBFA_GEMAT
Ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_800_26
RBG_16_RIF05_58_8_curated, RIF5, Bacteria

Not on your lists

comp(22268..22471)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W30_SOLUE
hypothetical protein
protein of unknown function DUF503; K09764 hypothetical protein Tax=RBG_16_RIF05_58_8_curated
13_2_20cm_scaffold_800_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22490..23290)
DNA (801bp) protein (267aa)
Translation initiation factor IF-2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N8_GEMAT
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas
Displaying 27 items

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