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13_2_20cm_scaffold_1085

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1085_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..1300)
DNA (1299bp) protein (433aa)
pepA; cytosol aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWY8_RUBXD
13_2_20cm_scaffold_1085_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1293..2495)
DNA (1203bp) protein (401aa)
icd; isocitrate dehydrogenase, nADP-dependent; K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=RBG_16_Gemmatimonadetes_66_8_curated
icd; isocitrate dehydrogenase, nADP-dependent; K00031 isocitrate dehydrogenase [EC:1.1.1.42] id=14429149 bin=bin3_NC10 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin3_NC10 organism_group=NC10
isocitrate dehydrogenase, NADP-dependent
13_2_20cm_scaffold_1085_3
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

2985..4037
DNA (1053bp) protein (351aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
Uncharacterized protein id=4040233 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1085_4
unknown

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4053..4598
DNA (546bp) protein (182aa)

This feature has no annotations

13_2_20cm_scaffold_1085_5
unknown

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4602..5156
DNA (555bp) protein (185aa)

This feature has no annotations

13_2_20cm_scaffold_1085_6
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5214..5648
DNA (435bp) protein (145aa)
Putative hemagglutinin/hemolysin-related protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VE1_STIAD
peptidase families s8 and s53 domain-containing protein
Putative hemagglutinin/hemolysin-related protein {ECO:0000313|EMBL:EAU64463.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; S
13_2_20cm_scaffold_1085_7
unknown

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comp(5668..6027)
DNA (360bp) protein (120aa)

This feature has no annotations

13_2_20cm_scaffold_1085_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6908..7366
DNA (459bp) protein (153aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_2_20cm_scaffold_1085_9
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(7373..7927)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CCH2_9LEPT
protein of unknown function Spy-related protein
Uncharacterized protein {ECO:0000313|EMBL:EHQ07432.1}; Flags: Precursor;; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;
13_2_20cm_scaffold_1085_10
unknown

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comp(7927..8367)
DNA (441bp) protein (147aa)

This feature has no annotations

13_2_20cm_scaffold_1085_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8364..8915)
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A927_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase ECF-type sigma factor
13_2_20cm_scaffold_1085_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9023..9622
DNA (600bp) protein (200aa)
transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
TetR-family transcriptional regulator id=1804082 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TetR family transcriptional regulator
13_2_20cm_scaffold_1085_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9629..10444
DNA (816bp) protein (272aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17) Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1I7_9BACT
13_2_20cm_scaffold_1085_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10871..11797
DNA (927bp) protein (309aa)
DhaS protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Aldehyde Dehydrogenase id=1250363 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
aldehyde dehydrogenase
13_2_20cm_scaffold_1085_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

11794..12987
DNA (1194bp) protein (398aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RI8_SYMTH
13_2_20cm_scaffold_1085_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12987..13748
DNA (762bp) protein (254aa)
enoyl-CoA hydratase/isomerase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Enoyl-CoA hydratase/isomerase id=4793456 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus metallidurans genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phenylacetate degradation, enoyl-CoA hydratase paaB
13_2_20cm_scaffold_1085_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

13748..14803
DNA (1056bp) protein (352aa)
PhaF protein; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Benzoyl-CoA oxygenase component B id=1975393 bin=GWD2_Deltaproteobacteria_55_8 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
bdxB; benzoyl-CoA oxygenase component b
13_2_20cm_scaffold_1085_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14800..15504
DNA (705bp) protein (235aa)
glycerophosphoryl diester phosphodiesterase family protein; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerophosphoryl diester phosphodiesterase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A928_GEMAT
glycerophosphoryl diester phosphodiesterase family protein
13_2_20cm_scaffold_1085_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15501..16370
DNA (870bp) protein (290aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
hypothetical protein n=1 Tax=Streptomyces sp. CNQ766 RepID=UPI00036C5E76
3-hydroxyacyl-CoA dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_1085_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16415..17224
DNA (810bp) protein (270aa)
Amidohydrolase 2 n=1 Tax=mine drainage metagenome RepID=T1BXN0_9ZZZZ
amidohydrolase; K07045 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
amidohydrolase 2
13_2_20cm_scaffold_1085_21
unknown

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17193..17939
DNA (747bp) protein (249aa)

This feature has no annotations

13_2_20cm_scaffold_1085_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17945..19204
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3AXY5_9ACTO
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66642.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M16 domain-containing protein
13_2_20cm_scaffold_1085_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19296..21320
DNA (2025bp) protein (675aa)
peptidase, m16 (pitrilysin) family (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase M16 domain-containing protein id=12557819 bin=CNBR_ACIDO species=Brevundimonas subvibrioides genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M16 domain-containing protein
13_2_20cm_scaffold_1085_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21347..22759
DNA (1413bp) protein (471aa)
amidohydrolase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5895F
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHG90870.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1085_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22756..23964
DNA (1209bp) protein (403aa)
Amidohydrolase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LT89_HALO1 rbh
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHG90871.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1085_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(24036..24299)
DNA (264bp) protein (88aa)
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
50S ribosomal protein L27
50S ribosomal protein L27 id=4831099 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
13_2_20cm_scaffold_1085_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(24305..24625)
DNA (321bp) protein (107aa)
50S ribosomal protein L21 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A931_GEMAT
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
rplU; 50S ribosomal protein L21
13_2_20cm_scaffold_1085_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24660..26219)
DNA (1560bp) protein (520aa)
cafA; ribonuclease G (EC:3.1.-.-); K08301 ribonuclease G [EC:3.1.26.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cafA; ribonuclease G (EC:3.1.-.-)
Ribonuclease G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A932_GEMAT rbh
13_2_20cm_scaffold_1085_29
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26451..28598
DNA (2148bp) protein (716aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase, serine peptidase, MEROPS family S09A n=1 Tax=Moorea producens 3L RepID=F4XIY9_9CYAN
Prolyl oligopeptidase, serine peptidase, MEROPS family S09A {ECO:0000313|EMBL:EGJ35446.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moor
13_2_20cm_scaffold_1085_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28595..28972)
DNA (378bp) protein (126aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A933_GEMAT
Displaying 30 items

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