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13_2_20cm_scaffold_1515

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1515_1

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comp(3..233)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA16138.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_2_20cm_scaffold_1515_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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401..1699
DNA (1299bp) protein (433aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glutamate--tRNA ligase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYI5_9BACT
glutamyl-tRNA synthetase
13_2_20cm_scaffold_1515_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1761..2564)
DNA (804bp) protein (268aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_2_20cm_scaffold_1515_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2614..3738)
DNA (1125bp) protein (375aa)
aminotransferase; K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=GWC2_Gemmatimonadetes_71_10_curated
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9I6_GEMAT
aminotransferase class I and II
13_2_20cm_scaffold_1515_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3846..6386)
DNA (2541bp) protein (847aa)
dinG; putative ATP-dependent DNA helicase (EC:3.6.1.-); K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T8_GEMAT rbh
helicase c2
13_2_20cm_scaffold_1515_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6383..7684)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T7_GEMAT rbh
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_2_20cm_scaffold_1515_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7681..9198)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T6_GEMAT
Tetratricopeptide repeat protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_2_20cm_scaffold_1515_8
unknown

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9511..10926
DNA (1416bp) protein (472aa)

This feature has no annotations

13_2_20cm_scaffold_1515_9
Arctogadus glacialis, Arctogadus, Gadiformes, Neopterygii, Chordata, Metazoa

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12041..12667
DNA (627bp) protein (209aa)
Antifreeze glycoprotein n=1 Tax=Arctogadus glacialis RepID=H2KMI7_ARCGL
Antifreeze glycoprotein {ECO:0000313|EMBL:AAQ09569.1}; TaxID=185735 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Aca
hypothetical protein
13_2_20cm_scaffold_1515_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12639..13376)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF4159
13_2_20cm_scaffold_1515_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13456..14181)
DNA (726bp) protein (242aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=24439016 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
tetrapyrrole methylase
13_2_20cm_scaffold_1515_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14183..15199)
DNA (1017bp) protein (339aa)
alias=gwe2_scaffold_8_567 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
alias=gwe2_scaffold_8_567 id=7202228 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
13_2_20cm_scaffold_1515_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(15218..15553)
DNA (336bp) protein (112aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T2_GEMAT
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1515_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15584..15997
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T1_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methylmalonyl-CoA epimerase
13_2_20cm_scaffold_1515_15
unknown

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comp(16036..16260)
DNA (225bp) protein (75aa)

This feature has no annotations

13_2_20cm_scaffold_1515_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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16454..17182
DNA (729bp) protein (243aa)
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2); K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S9_GEMAT
13_2_20cm_scaffold_1515_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17195..18499
DNA (1305bp) protein (435aa)
Hpt domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 17 items

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