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13_2_20cm_scaffold_5791

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5791_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(2..130)
DNA (129bp) protein (43aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated
rpoN; RNA polymerase sigma factor
13_2_20cm_scaffold_5791_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(127..1302)
DNA (1176bp) protein (392aa)
putative ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V0_GEMAT rbh
ABC transporter related protein
13_2_20cm_scaffold_5791_3
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(1299..2618)
DNA (1320bp) protein (440aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S04962 Tax=RBG_16_Acidobacteria_68_9_curated
13_2_20cm_scaffold_5791_4
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(2615..3229)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V2_GEMAT
hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
protein of unknown function DUF1239
13_2_20cm_scaffold_5791_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3226..4200)
DNA (975bp) protein (325aa)
kdsD; arabinose 5-phosphate isomerase (EC:5.3.1.13); K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] Tax=GWC2_Gemmatimonadetes_71_10_curated
Arabinose 5-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V3_GEMAT
KpsF/GutQ family protein
13_2_20cm_scaffold_5791_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4169..4735)
DNA (567bp) protein (189aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45); K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] Tax=GWC2_Gemmatimonadetes_71_1
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V4_GEMAT
13_2_20cm_scaffold_5791_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4799..5239)
DNA (441bp) protein (147aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=GWC2_Gemmatimonadetes_71_10_curated
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V5_GEMAT
13_2_20cm_scaffold_5791_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5572..7236)
DNA (1665bp) protein (555aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
CTP synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V6_GEMAT rbh
CTP synthase
13_2_20cm_scaffold_5791_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7233..7859)
DNA (627bp) protein (209aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-k
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=KDSB_GEMAT
3-deoxy-manno-octulosonate cytidylyltransferase
13_2_20cm_scaffold_5791_10
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8014..8604)
DNA (591bp) protein (197aa)
Anthranilate synthase subunit II {ECO:0000313|EMBL:EST51678.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EST51678.1};; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibac
Anthranilate synthase subunit II n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M8L5_9BACL
glutamine amidotransferase of anthranilate synthase
13_2_20cm_scaffold_5791_11
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8604..9044)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=D7ADL7_GEOSK
Uncharacterized protein {ECO:0000313|EMBL:KIE43918.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
hypothetical protein
13_2_20cm_scaffold_5791_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9059..9475)
DNA (417bp) protein (139aa)
Thioesterase superfamily protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGE9_9BACT
Thioesterase superfamily protein {ECO:0000313|EMBL:EEF61000.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sou
thioesterase
13_2_20cm_scaffold_5791_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9525..10403)
DNA (879bp) protein (293aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGI3_ANADE
13_2_20cm_scaffold_5791_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10427..10702)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD18_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_2_20cm_scaffold_5791_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10706..11566)
DNA (861bp) protein (287aa)
Tyrosine recombinase XerC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W1_GEMAT
xerD; tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Tyrosine recombinase xerC
13_2_20cm_scaffold_5791_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(11557..12027)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6K7_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ39632.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_2_20cm_scaffold_5791_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12044..12646)
DNA (603bp) protein (201aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W2_GEMAT
hypothetical membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SNARE associated protein
13_2_20cm_scaffold_5791_18
CG_Mariprof_04, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12643..13116)
DNA (474bp) protein (158aa)
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase (EC:4.6.1.12) Tax=CG_Mariprof_04
Bifunctional enzyme IspD/IspF n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=ISPDF_ANADF
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
13_2_20cm_scaffold_5791_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13118..13513)
DNA (396bp) protein (132aa)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=2 Tax=Cloacimonetes RepID=B0VG29_CLOAI
5-(carboxyamino)imidazole ribonucleotide mutase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_5791_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13547..14590)
DNA (1044bp) protein (348aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanth
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W4_GEMAT rbh
menaquinone biosynthesis protein
13_2_20cm_scaffold_5791_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14593..14967)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8W5_GEMAT
hypothetical protein; K07081 Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF178
Displaying 21 items

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