ggKbase home page

13_2_20cm_scaffold_6296

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6296_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..5479)
DNA (5478bp) protein (1826aa)
Conserved repeat domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FKG7_DESAA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_2_20cm_scaffold_6296_2
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5492..6715)
DNA (1224bp) protein (408aa)
Uncharacterized protein (Fragment) n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N3F5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIF91552.1}; Flags: Fragment;; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsuk
hypothetical protein
13_2_20cm_scaffold_6296_3

Not on your lists

comp(6754..7257)
DNA (504bp) protein (168aa)
Conserved repeat domain protein n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XIQ1_SYNP2
Marine sediment metagenome DNA, contig: S01H1_L05707 {ECO:0000313|EMBL:GAF67307.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
13_2_20cm_scaffold_6296_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7661..10147)
DNA (2487bp) protein (829aa)
transporter n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4069 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWY39304.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
13_2_20cm_scaffold_6296_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10225..11625)
DNA (1401bp) protein (467aa)
Member of the two-component regulatory system atoS/atoC n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8I1_SALRM rbh
rrp; response regulatory protein
Response regulatory protein {ECO:0000313|EMBL:ABC44001.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
13_2_20cm_scaffold_6296_6
unknown

Not on your lists

11689..11856
DNA (168bp) protein (56aa)

This feature has no annotations

13_2_20cm_scaffold_6296_7
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12065..14758
DNA (2694bp) protein (898aa)
Two-component hybrid sensor and regulator n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LR3_SYMTH rbh
two-component hybrid sensor and regulator
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAD41383.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobac
13_2_20cm_scaffold_6296_8
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14821..15207
DNA (387bp) protein (129aa)
4-oxalocrotonate tautomerase n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036DB1EF
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:KHA71195.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas c
4-oxalocrotonate tautomerase
13_2_20cm_scaffold_6296_9
unknown

Not on your lists

15299..15616
DNA (318bp) protein (106aa)

This feature has no annotations

13_2_20cm_scaffold_6296_10
unknown

Not on your lists

15683..15859
DNA (177bp) protein (59aa)

This feature has no annotations

13_2_20cm_scaffold_6296_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15903..18308)
DNA (2406bp) protein (802aa)
Putative aldehyde dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9C6_GEMAT
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AHG90561.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_6296_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18305..19339)
DNA (1035bp) protein (345aa)
Deoxyribose-phosphate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9C7_GEMAT
deoxyribose-phosphate aldolase
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:AHG90560.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_6296_13
unknown

Not on your lists

comp(19362..19490)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 13 items

View Taxonomy