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13_2_20cm_scaffold_10441

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_10441_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..581
DNA (579bp) protein (193aa)
ftsY; signal recognition particle-docking protein ftsy; K03110 fused signal recognition particle receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Signal recognition particle receptor FtsY id=4253322 bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
signal recognition particle-docking protein FtsY
13_2_20cm_scaffold_10441_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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578..1681
DNA (1104bp) protein (368aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] T
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD id=4253324 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_10441_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1828..2430
DNA (603bp) protein (201aa)
RibC; riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=GWA2_Rokubacteria_73_35_curated
Riboflavin synthase alpha chain (Fragment) id=4253327 bin=GWA2_Methylomirabilis_73_35 species=Heliobacillus mobilis genus=Heliobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
riboflavin synthase subunit alpha
13_2_20cm_scaffold_10441_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2427..3638
DNA (1212bp) protein (404aa)
riboflavin biosynthesis protein RibA (EC:3.5.4.25); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_cura
riboflavin biosynthesis GTP cyclohydrolase II RibA (EC:3.5.4.25)
Riboflavin biosynthesis protein RibA id=4253329 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_10441_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3640..4014
DNA (375bp) protein (125aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=GWA2_Rokubacteria_73_35_curated
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase id=4041875 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_10441_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4104..4520
DNA (417bp) protein (139aa)
N utilization substance protein B homolog id=4041876 bin=GWA2_Methylomirabilis_73_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nusB; transcription antitermination factor NusB; K03625 N utilization substance protein B Tax=GWA2_Rokubacteria_73_35_curated
nusB; transcription antitermination factor NusB
13_2_20cm_scaffold_10441_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4529..5254
DNA (726bp) protein (242aa)
Metallophosphoesterase id=4041877 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
phosphatase family protein Tax=GWA2_Rokubacteria_73_35_curated
phosphatase family protein
13_2_20cm_scaffold_10441_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5242..6774
DNA (1533bp) protein (511aa)
lnt; Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC:2.3.1.-) Tax=GWA2_Rokubacteria_73_35_curated
Apolipoprotein N-acyltransferase id=4041878 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lnt-1; apolipoprotein N-acyltransferase
13_2_20cm_scaffold_10441_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6889..7878
DNA (990bp) protein (330aa)
hypothetical protein; K02836 peptide chain release factor 2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptide chain release factor 2 id=4041879 bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
peptide chain release factor 2
13_2_20cm_scaffold_10441_10
unknown

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7933..8028
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 10 items

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