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13_2_20cm_scaffold_1358

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1358_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..242)
DNA (240bp) protein (80aa)
regulator of chromosome condensation RCC1 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
13_2_20cm_scaffold_1358_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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580..1362
DNA (783bp) protein (261aa)
enoyl-CoA hydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Enoyl-CoA hydratase/isomerase id=4681939 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium tusciae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
enoyl-CoA hydratase/isomerase
13_2_20cm_scaffold_1358_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1371..2423
DNA (1053bp) protein (351aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase, group 1 id=4534448 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
13_2_20cm_scaffold_1358_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2420..2830
DNA (411bp) protein (137aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4534447 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1358_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2830..3234
DNA (405bp) protein (135aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=GWA2_Rokubacteria_73_35_curated
6-carboxy-5,6,7,8-tetrahydropterin synthase id=4681942 bin=GWA2_Methylomirabilis_73_35 species=Gracilibacillus halophilus genus=Gracilibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_1358_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3231..3794
DNA (564bp) protein (188aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
folE; GTP cyclohydrolase I (EC:3.5.4.16) id=14626369 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
folE; GTP cyclohydrolase I (EC:3.5.4.16)
13_2_20cm_scaffold_1358_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

3791..4522
DNA (732bp) protein (244aa)
short chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
GTP cyclohydrolase I id=4681943 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short chain dehydrogenase
13_2_20cm_scaffold_1358_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4576..4902
DNA (327bp) protein (109aa)
iscA; iron-binding protein IscA (iron-sulfur cluster assembly protein) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Iron-binding protein IscA (Iron-sulfur cluster assembly protein) id=4681944 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
iscA; iron-binding protein IscA (iron-sulfur cluster assembly protein)
13_2_20cm_scaffold_1358_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4917..5588
DNA (672bp) protein (224aa)
moaDE; molybdopterin converting factor, subunits 1/2; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
molybdopterin converting factor subunit 1; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] id=14626372 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
MoaD family protein
13_2_20cm_scaffold_1358_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5593..6966
DNA (1374bp) protein (458aa)
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATPase; tRNA(Ile)-lysidine synthase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase id=4681946 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1358_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

6988..8400
DNA (1413bp) protein (471aa)
degQ; protease degQ (EC:3.4.21.-); K04772 serine protease DegQ [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Protease Do id=4681947 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
degQ; periplasmic trypsin-like serine protease lipoprotein DegQ
13_2_20cm_scaffold_1358_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8397..9821
DNA (1425bp) protein (475aa)
two component sigma54 specific Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
AtoC; response regulator; K07714 two-component system, NtrC family, response regulator AtoC id=14626375 bin=bin7_NC10_sister species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
two component sigma54 specific Fis family transcriptional regulator
Displaying 12 items

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