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13_2_20cm_scaffold_1373

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1373_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..353)
DNA (351bp) protein (117aa)
hemolysin A; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rRNA methylase; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] id=14627678 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hemolysin A
13_2_20cm_scaffold_1373_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(353..1069)
DNA (717bp) protein (239aa)
Putative peptidase, S54 (Rhomboid) family id=2598285 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
peptidase, S54 (Rhomboid) family Tax=GWA2_Rokubacteria_73_35_curated
peptidase, S54 (Rhomboid) family
13_2_20cm_scaffold_1373_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1066..2310)
DNA (1245bp) protein (415aa)
processing peptidase (EC:3.4.24.64) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
processing peptidase (EC:3.4.24.64)
Peptidase M16B family, nonpeptidase-like protein id=2598286 bin=GWA2_Methylomirabilis_73_35 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_1373_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2307..3572)
DNA (1266bp) protein (422aa)
M16 family peptidase; K07263 zinc protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M16 domain protein id=2598289 bin=GWA2_Methylomirabilis_73_35 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M16 domain protein
13_2_20cm_scaffold_1373_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3937..4617
DNA (681bp) protein (227aa)
hypothetical protein id=2598292 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
collagen triple helix repeat protein
13_2_20cm_scaffold_1373_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4769..6049
DNA (1281bp) protein (427aa)
peptidase S46 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase S46 id=2598295 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
periplasmic serine proteinase
13_2_20cm_scaffold_1373_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6184..7041)
DNA (858bp) protein (286aa)
adenylosuccinate lyase Tax=GWA2_Rokubacteria_73_35_curated
Adenylosuccinate lyase id=2598310 bin=GWA2_Methylomirabilis_73_35 species=Azotobacter vinelandii genus=Azotobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adenylosuccinate lyase
13_2_20cm_scaffold_1373_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7447..7785)
DNA (339bp) protein (113aa)
Histidine triad (HIT) protein id=4334202 bin=GWA2_Methylomirabilis_73_35 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=GWA2_Rokubacteria_73_35_curated
histidine triad (HIT) protein
13_2_20cm_scaffold_1373_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7854..7973
DNA (120bp) protein (40aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4334200 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1373_10
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(8008..8844)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I772_CALAS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM01110.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
13_2_20cm_scaffold_1373_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(8867..10852)
DNA (1986bp) protein (662aa)
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2] id=14625343 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
dihydropyrimidinase; K01464 dihydropyrimidinase [EC:3.5.2.2] Tax=CSP1_6_Rokubacteria
dihydropyrimidinase (EC:3.5.2.2)
13_2_20cm_scaffold_1373_12
unknown

Not on your lists

comp(11000..11233)
DNA (234bp) protein (78aa)

This feature has no annotations

13_2_20cm_scaffold_1373_13
unknown

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comp(11230..11421)
DNA (192bp) protein (64aa)

This feature has no annotations

13_2_20cm_scaffold_1373_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11659..13626)
DNA (1968bp) protein (656aa)
asparagine synthase Tax=GWA2_Rokubacteria_70_23_curated
Asparagine synthetase id=4814774 bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
asparagine synthase
13_2_20cm_scaffold_1373_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13571..14947)
DNA (1377bp) protein (459aa)
arnT; undecaprenyl phosphate--lipid A 4-amino-4-deoxy-L-arabinose transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glycosyl transferase, family 39 id=2155472 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
13_2_20cm_scaffold_1373_16
unknown

Not on your lists

comp(15328..15597)
DNA (270bp) protein (90aa)

This feature has no annotations

13_2_20cm_scaffold_1373_17
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16077..16493
DNA (417bp) protein (139aa)
gnl1; gluconolactonase (EC:3.1.1.17)
Gluconolactonase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WJY9_9BURK
Gluconolactonase {ECO:0000313|EMBL:EHR70961.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Displaying 17 items

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