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13_2_20cm_scaffold_1650

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1650_1
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8..736)
DNA (729bp) protein (243aa)
Transcriptional regulator, GntR family n=1 Tax=Thermincola potens (strain JR) RepID=D5X921_THEPJ
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADG81021.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (
13_2_20cm_scaffold_1650_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

750..1925
DNA (1176bp) protein (392aa)
gentisate 1,2-dioxygenase (EC:1.13.11.4); K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Gentisate 1,2-dioxygenase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XN70_9RALS
gentisate 1,2-dioxygenase
13_2_20cm_scaffold_1650_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1742..2785)
DNA (1044bp) protein (348aa)
GAF/GGDEF domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Diguanylate cyclase with GAF sensor id=4699803 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF sensor-containing diguanylate cyclase
13_2_20cm_scaffold_1650_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2794..3801)
DNA (1008bp) protein (336aa)
GAF/GGDEF domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Diguanylate cyclase with GAF sensor id=4699803 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF sensor-containing diguanylate cyclase
13_2_20cm_scaffold_1650_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3882..4952)
DNA (1071bp) protein (357aa)
GAF sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
GAF/GGDEF domain-containing protein id=4699804 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF sensor-containing diguanylate cyclase
13_2_20cm_scaffold_1650_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5314..6864
DNA (1551bp) protein (517aa)
Predicted protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Predicted protein id=4699805 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Micromonas taxon_order=Mamiellales taxon_class=Mamiellophyceae phylum=Chlorophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_1650_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6861..7298)
DNA (438bp) protein (146aa)
ppox class F420-dependent protein Tax=GWA2_Rokubacteria_73_35_curated
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding id=4348874 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
13_2_20cm_scaffold_1650_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7295..8131)
DNA (837bp) protein (279aa)
oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative N5,N10-methylenetetrahydromethanopterin reductase-related protein id=4935480 bin=GWC2_Methylomirabilis_70_24 species=marine gamma proteobacterium HTCC2143 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
oxidoreductase
13_2_20cm_scaffold_1650_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8154..8945)
DNA (792bp) protein (264aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG31_SINAD
lactoylglutathione lyase-like lyase
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:AGA27626.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singul
13_2_20cm_scaffold_1650_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8942..9892)
DNA (951bp) protein (317aa)
formamidase (EC:3.5.1.49) Tax=GWC2_Rokubacteria_70_16_curated
Formamidase (EC:3.5.1.49)
Formamidase id=4766431 bin=GWC2_Methylomirabilis_70_16 species=Bacillus selenitireducens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_2_20cm_scaffold_1650_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9919..10401)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003642FF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87560.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
13_2_20cm_scaffold_1650_12
Rhizobium sp. TAL1145, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10359..10697)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031FBBB7
PydA {ECO:0000313|EMBL:AAW28146.1}; TaxID=147233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. TA
putative dioxygenase
13_2_20cm_scaffold_1650_13
Amorphus coralli, Amorphus, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10701..11042)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000381661B
13_2_20cm_scaffold_1650_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11035..11418)
DNA (384bp) protein (128aa)
cupin 2 barrel domain-containing protein Tax=RBG_16_Betaproteobacteria_64_18_curated
Putative uncharacterized protein id=2193858 bin=GWB2_Deltaproteobacteria_65_81 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
13_2_20cm_scaffold_1650_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11603..14056
DNA (2454bp) protein (818aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=GWA2_Rokubacteria_73_35_curated
Putative PAS/PAC sensor protein id=4699808 bin=GWA2_Methylomirabilis_73_35 species=Actinosynnema mirum genus=Actinosynnema taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
PAS/PAC sensor protein
13_2_20cm_scaffold_1650_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14150..15364
DNA (1215bp) protein (405aa)
ABC transporter substrate binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I9I4_AZOC5
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter substrate-binding protein
13_2_20cm_scaffold_1650_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15364..16902
DNA (1539bp) protein (513aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GVJ2_9PROT
branched chain amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FUL
branched chain amino acid ABC transporter
13_2_20cm_scaffold_1650_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16911..17858
DNA (948bp) protein (316aa)
Branched-chain amino acid ABC transporter, ATP-binding component (LivG-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8N4_AZOL4
branched-chain amino acid ABC transporter, ATP-binding component (LivG-like); K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
branched-chain amino acid ABC transporter, ATP-binding component (LivG-like)
13_2_20cm_scaffold_1650_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17846..18547
DNA (702bp) protein (234aa)
Branched-chain amino acid ABC transporter,ATP-binding component (LivF-like) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AER0_AZOBR
branched-chain amino acid ABC transporter,ATP-binding component (LivF-like) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter
13_2_20cm_scaffold_1650_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18544..18795
DNA (252bp) protein (84aa)
adenine deaminase; K15358 enamidase [EC:3.5.2.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cytosine deaminase-like metal-dependent hydrolase id=3847111 bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
adenine deaminase
Displaying 20 items

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