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13_2_20cm_scaffold_1900

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1900_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..464
DNA (462bp) protein (154aa)
coxS; carbon-monoxide dehydrogenase small subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
(2Fe-2S)-binding protein id=2546022 bin=GWA2_Methylomirabilis_73_35 species=Amycolatopsis decaplanina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
(2Fe-2S)-binding protein
13_2_20cm_scaffold_1900_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

551..2896
DNA (2346bp) protein (782aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein id=3729544 bin=GWF2_Methylomirabilis_70_14 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
dehydrogenase
13_2_20cm_scaffold_1900_3
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2978..4108
DNA (1131bp) protein (377aa)
Conserved hypothetical secreted protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K1L6_AZOSB
hypothetical protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:CAL92721.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp
13_2_20cm_scaffold_1900_4
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(4145..4615)
DNA (471bp) protein (157aa)
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
Putative uncharacterized protein id=1699444 bin=GWB2_Chloroflexi_49_20 species=Bacillus sp. M 2-6 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
13_2_20cm_scaffold_1900_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4630..5010)
DNA (381bp) protein (127aa)
Putative uncharacterized protein id=3677765 bin=GWF2_Methylomirabilis_70_14 species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_2_20cm_scaffold_1900_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5003..6157)
DNA (1155bp) protein (385aa)
acaB_8; acetyl-CoA C-acyltransferase 8 (EC:2.3.1.16)
acetyl-CoA C-acyltransferase 8 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Propanoyl-CoA C-acyltransferase id=2338963 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_1900_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6215..7174
DNA (960bp) protein (320aa)
Predicted dehydrogenases and related proteins Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2338962 bin=GWA2_Methylomirabilis_73_35 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative dehydrogenase
13_2_20cm_scaffold_1900_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7168..8868
DNA (1701bp) protein (567aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
protein binding protein id=14626651 bin=bin7_NC10_sister species=Dasypus novemcinctus genus=Dasypus taxon_order=Cingulata taxon_class=Mammalia phylum=Chordata tax=bin7_NC10_sister organism_group=NC10 rbh
hypothetical protein
13_2_20cm_scaffold_1900_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8918..9106)
DNA (189bp) protein (63aa)
rpfG; response regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Response regulator id=2338960 bin=GWA2_Methylomirabilis_73_35 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
response regulator
13_2_20cm_scaffold_1900_10
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9299..9922
DNA (624bp) protein (208aa)
id=2614752 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:CCV16199.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
13_2_20cm_scaffold_1900_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9915..10871)
DNA (957bp) protein (319aa)
Diguanylate cyclase id=2338959 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
diguanylate cyclase Tax=GWA2_Rokubacteria_73_35_curated
diguanylate cyclase
13_2_20cm_scaffold_1900_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10935..11171
DNA (237bp) protein (79aa)
SirA family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SirA family protein id=2338958 bin=GWA2_Methylomirabilis_73_35 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SirA family protein
13_2_20cm_scaffold_1900_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11131..12336
DNA (1206bp) protein (402aa)
class V aminotransferase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aminotransferase class V id=2338873 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cysteine desulfurase
13_2_20cm_scaffold_1900_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12338..13099
DNA (762bp) protein (254aa)
Hydrolase, haloacid dehalogenase-like family id=2338871 bin=GWA2_Methylomirabilis_73_35 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
haloacid dehalogenase domain-containing protein hydrolase Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_1900_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13271..13720
DNA (450bp) protein (150aa)
hypothetical protein id=2338870 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_1900_16
unknown

Not on your lists

comp(13736..13819)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 16 items

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