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13_2_20cm_scaffold_1939

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1939_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1..474
DNA (474bp) protein (158aa)
ymxG; hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Peptidase M16 domain protein id=2306171 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M16 domain-containing protein
13_2_20cm_scaffold_1939_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

712..2010
DNA (1299bp) protein (433aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=14625424 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
adenylosuccinate lyase (EC:4.3.2.2)
13_2_20cm_scaffold_1939_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2007..2747
DNA (741bp) protein (247aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase id=2306169 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_1939_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2744..3013
DNA (270bp) protein (90aa)
Phosphoribosylformylglycinamidine synthase protein id=2306168 bin=GWA2_Methylomirabilis_73_35 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
yexA; phosphoribosylformylglycinamidine synthase protein Tax=GWA2_Rokubacteria_73_35_curated
yexA; phosphoribosylformylglycinamidine synthase protein
13_2_20cm_scaffold_1939_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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3026..3739
DNA (714bp) protein (238aa)
phosphoribosylformylglycinamidine synthase I; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
phosphoribosylformylglycinamidine synthase I; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=14625426 bin=bin7_NC10_sister species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
phosphoribosylformylglycinamidine synthase subunit I (EC:6.3.5.3)
13_2_20cm_scaffold_1939_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3746..5968
DNA (2223bp) protein (741aa)
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=14625427 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
13_2_20cm_scaffold_1939_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5949..7364
DNA (1416bp) protein (472aa)
purF; amidophosphoribosyltransferase (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) (EC:2.4.2.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
purF; amidophosphoribosyltransferase (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) (EC:2.4.2.14) id=14625428 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
purF; amidophosphoribosyltransferase (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATase) (EC:2.4.2.14)
13_2_20cm_scaffold_1939_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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8560..8994
DNA (435bp) protein (145aa)
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase, folate-dependent id=4153845 bin=GWC2_Methylomirabilis_70_16 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_1939_9
unknown

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8994..9119
DNA (126bp) protein (42aa)

This feature has no annotations

13_2_20cm_scaffold_1939_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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9116..10489
DNA (1374bp) protein (458aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydro
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] id=14625435 bin=bin7_NC10_sister species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3)
13_2_20cm_scaffold_1939_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10504..11409
DNA (906bp) protein (302aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Tetratricopeptide TPR_2 repeat protein id=3389043 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
hypothetical protein
13_2_20cm_scaffold_1939_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11420..12688
DNA (1269bp) protein (423aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase id=3389045 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
13_2_20cm_scaffold_1939_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12685..13173
DNA (489bp) protein (163aa)
hypothetical protein; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB42_AMMDK
Displaying 13 items

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