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13_2_20cm_scaffold_2069

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2069_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(142..1197)
DNA (1056bp) protein (352aa)
id=4698146 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=4698146 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_2_20cm_scaffold_2069_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1194..1715)
DNA (522bp) protein (174aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4429854 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_2069_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1755..2051
DNA (297bp) protein (99aa)
id=14625964 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_2_20cm_scaffold_2069_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2102..3175)
DNA (1074bp) protein (358aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histidinol-phosphate aminotransferase id=4429857 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
histidinol-phosphate aminotransferase
13_2_20cm_scaffold_2069_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3244..5832
DNA (2589bp) protein (863aa)
UTP-GlnB (protein PII) uridylyltransferase, GlnD; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
UTP-GlnB (protein PII) uridylyltransferase, GlnD; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] id=14625966 bin=bin7_NC10_sister species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
glnD; nitrogen regulatory protein P-II uridylyltransferase, GlnD
13_2_20cm_scaffold_2069_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5835..8432
DNA (2598bp) protein (866aa)
Lytic transglycosylase id=4793525 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Lytic transglycosylase Tax=GWA2_Rokubacteria_73_35_curated
lytic transglycosylase domain-containing protein
13_2_20cm_scaffold_2069_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8437..8655)
DNA (219bp) protein (73aa)
Aminotransferase, class I and II Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_2_20cm_scaffold_2069_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8762..9139
DNA (378bp) protein (126aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glyoxalase/bleomycin resistance protein/dioxygenase id=14626134 bin=bin7_NC10_sister species=Pandoraea sp. SD6-2 genus=Pandoraea taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
lactoylglutathione lyase
13_2_20cm_scaffold_2069_9
unknown

Not on your lists

9225..9362
DNA (138bp) protein (46aa)

This feature has no annotations

13_2_20cm_scaffold_2069_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9471..11441)
DNA (1971bp) protein (657aa)
dehydrogenase, E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=GWA2_Rokubacteria_73_35_curated
Dehydrogenase E1 component id=3013129 bin=GWA2_Methylomirabilis_73_35 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
dehydrogenase, E1 component
13_2_20cm_scaffold_2069_11
RLO_PLX_64_10, Bacteria

Not on your lists

11578..12471
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000378658A
phytanoyl-CoA dioxygenase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
phytanoyl-CoA dioxygenase family protein
13_2_20cm_scaffold_2069_12
unknown

Not on your lists

comp(12604..13407)
DNA (804bp) protein (268aa)

This feature has no annotations

13_2_20cm_scaffold_2069_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13751..14644
DNA (894bp) protein (298aa)
Binding-protein-dependent transport system inner membrane component id=4138947 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
binding-protein-dependent transport systems inner membrane component
13_2_20cm_scaffold_2069_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14645..15295
DNA (651bp) protein (217aa)
Binding-protein-dependent transport system inner membrane component id=4015915 bin=GWF2_Methylomirabilis_70_14 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
putative sugar ABC transporter, permease protein
Displaying 14 items

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