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13_2_20cm_scaffold_2525

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2525_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..751
DNA (750bp) protein (250aa)
Lactam utilization-like protein (lamB); K07160 UPF0271 protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lactam utilization-like protein (lamB); K07160 UPF0271 protein id=14628095 bin=bin7_NC10_sister species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
LamB/YcsF family protein
13_2_20cm_scaffold_2525_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

793..1212
DNA (420bp) protein (140aa)
Uncharacterized protein id=4543822 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_2_20cm_scaffold_2525_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1442..2095
DNA (654bp) protein (218aa)
alpha/beta hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
alpha/beta hydrolase id=14626075 bin=bin7_NC10_sister species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase
13_2_20cm_scaffold_2525_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2062..3186
DNA (1125bp) protein (375aa)
gcvT; glycine cleavage system aminomethyltransferase T; K00605 aminomethyltransferase [EC:2.1.2.10] Tax=GWA2_Rokubacteria_73_35_curated
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10)
Aminomethyltransferase id=4193474 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_2525_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3189..3581
DNA (393bp) protein (131aa)
glycine cleavage system protein H id=4193475 bin=GWA2_Methylomirabilis_73_35 species=Bacillus sp. m3-13 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycine cleavage system protein H; K02437 glycine cleavage system H protein Tax=GWA2_Rokubacteria_73_35_curated
glycine cleavage system H protein
13_2_20cm_scaffold_2525_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3581..4930
DNA (1350bp) protein (450aa)
gcvPA; GcvPA; K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=GWA2_Rokubacteria_73_35_curated
protein GcvPA; K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] id=14628076 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
glycine dehydrogenase (decarboxylating) subunit 1 (EC:1.4.4.2)
13_2_20cm_scaffold_2525_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4930..6396
DNA (1467bp) protein (489aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] id=14628075 bin=bin7_NC10_sister species=Geobacillus sp. GHH01 genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 rbh
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
13_2_20cm_scaffold_2525_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6375..7199
DNA (825bp) protein (275aa)
lipoate protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Octanoyltransferase LipM id=5020377 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
biotin/lipoate A/B protein ligase
13_2_20cm_scaffold_2525_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7196..7636
DNA (441bp) protein (147aa)
NUDIX family hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX family hydrolase id=5020378 bin=GWA2_Methylomirabilis_73_35 species=Thermoproteus tenax genus=Thermoproteus taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphohydrolase
13_2_20cm_scaffold_2525_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7633..9102
DNA (1470bp) protein (490aa)
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase id=5020379 bin=GWA2_Methylomirabilis_73_35 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_2525_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9102..9968
DNA (867bp) protein (289aa)
PHP domain-containing protein; K07053 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PHP domain protein id=5020380 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
PHP domain-containing protein
13_2_20cm_scaffold_2525_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9984..10331
DNA (348bp) protein (116aa)
ArsC family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ArsC family protein id=5020381 bin=GWA2_Methylomirabilis_73_35 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ArsC family protein
Displaying 12 items

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