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13_2_20cm_scaffold_2834

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2834_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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3..1424
DNA (1422bp) protein (474aa)
NAD+ synthetase (EC:6.3.5.1); K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
NH(3)-dependent NAD(+) synthetase (EC:6.3.1.5)
NAD(+) synthase (Glutamine-hydrolyzing) id=4759439 bin=GWC2_Methylomirabilis_70_16 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_2834_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1571..2446
DNA (876bp) protein (292aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Lipid A biosynthesis acyltransferase id=4785123 bin=GWC2_Methylomirabilis_70_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative acyltransferase
13_2_20cm_scaffold_2834_3
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2464..3693
DNA (1230bp) protein (410aa)
Polyketide synthase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1FUC5_9PSEU
Polyketide synthase {ECO:0000313|EMBL:EOD62968.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 445
pks4-2; type-I PKS
13_2_20cm_scaffold_2834_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3654..5516)
DNA (1863bp) protein (621aa)
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWA2_Rokubacteria_73_35_curated
Lipid A export ATP-binding/permease protein MsbA id=4600885 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phospholipid-lipopolysaccharide ABC transporter
13_2_20cm_scaffold_2834_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5513..6631)
DNA (1119bp) protein (373aa)
group 1 glycosyl transferase id=14625816 bin=bin7_NC10_sister species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
group 1 glycosyl transferase
13_2_20cm_scaffold_2834_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6631..7713)
DNA (1083bp) protein (361aa)
lpsC; perosamine synthetase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
DegT/DnrJ/EryC1/StrS aminotransferase id=4600877 bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
pyridoxal phosphate-dependent protein
13_2_20cm_scaffold_2834_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7710..8195)
DNA (486bp) protein (162aa)
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
flavin reductase domain-containing protein id=14625818 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative oxidoreductase
13_2_20cm_scaffold_2834_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8282..9388
DNA (1107bp) protein (369aa)
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Mrp id=4759406 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_2834_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9393..10031
DNA (639bp) protein (213aa)
lon3; ATP-dependent protease La; K07157 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
lon3; ATP-dependent protease La; K07157 id=14625820 bin=bin7_NC10_sister species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
lon3; ATP-dependent protease La
13_2_20cm_scaffold_2834_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10028..10681
DNA (654bp) protein (218aa)
protease Do (EC:3.4.21.108) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
protease Do (EC:3.4.21.108) id=14625822 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
degQ; periplasmic trypsin-like serine protease lipoprotein DegQ
Displaying 10 items

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