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13_2_20cm_scaffold_2867

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2867_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..327)
DNA (327bp) protein (109aa)
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase id=4996875 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_2867_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

563..1633
DNA (1071bp) protein (357aa)
glycine cleavage system t protein (EC:2.1.2.10); K06980 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glycine cleavage system t protein (EC:2.1.2.10); K06980 id=14627031 bin=bin7_NC10_sister species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
gcvT1; glycine cleavage system T protein
13_2_20cm_scaffold_2867_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1740..3770
DNA (2031bp) protein (677aa)
hypothetical protein; K06888 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4996873 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_2867_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

3942..4544
DNA (603bp) protein (201aa)
id=24403804 Tax=RBG_16_RIF_WS3X_71_46_curated
id=24403804 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_2_20cm_scaffold_2867_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

4541..4981
DNA (441bp) protein (147aa)
peptidase M50 id=24403803 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase M50 Tax=RBG_16_RIF_WS3X_71_46_curated
peptidase M50
13_2_20cm_scaffold_2867_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

4951..5271
DNA (321bp) protein (107aa)
peptidase M50 id=24403803 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase M50 Tax=RBG_16_RIF_WS3X_71_46_curated
peptidase M50
13_2_20cm_scaffold_2867_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5370..5738
DNA (369bp) protein (123aa)
hypothetical protein id=14626717 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_2_20cm_scaffold_2867_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5815..7671
DNA (1857bp) protein (619aa)
AMP-dependent synthetase and ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=GWA2_Rokubacteria_73_35_curated
AMP-dependent synthetase and ligase id=4426329 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AMP-dependent synthetase and ligase
13_2_20cm_scaffold_2867_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7668..8456
DNA (789bp) protein (263aa)
Blr6472 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89G73_BRADU
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
13_2_20cm_scaffold_2867_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8718..8924
DNA (207bp) protein (69aa)
thiamine biosynthesis protein ThiS Tax=GWA2_Rokubacteria_73_35_curated
thiamine biosynthesis protein ThiS id=4426339 bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas sp. S9 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Sulfur carrier protein ThiS
13_2_20cm_scaffold_2867_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8975..9754
DNA (780bp) protein (260aa)
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiazole synthase id=5006704 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
thiG; thiazole synthase
13_2_20cm_scaffold_2867_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9742..10365
DNA (624bp) protein (208aa)
thiamine monophosphate synthase; K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiamine-phosphate synthase id=5006705 bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
thiamine-phosphate synthase
13_2_20cm_scaffold_2867_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

10362..11453
DNA (1092bp) protein (364aa)
glycine oxidase; K03153 glycine oxidase [EC:1.4.3.19] Tax=GWA2_Rokubacteria_70_23_curated
Putative glycine oxidase id=4584627 bin=GWF2_Methylomirabilis_70_14 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycine oxidase ThiO
13_2_20cm_scaffold_2867_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11795..12223
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14629111 bin=bin8_Chloro species=Verrucomicrobium sp. 3C genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_2_20cm_scaffold_2867_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12243..13130)
DNA (888bp) protein (296aa)
two-component hybrid sensor and regulator Tax=GWA2_Rokubacteria_73_35_curated
Two-component hybrid sensor and regulator id=5006707 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative hybrid sensor histidine kinase
13_2_20cm_scaffold_2867_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13203..14531
DNA (1329bp) protein (443aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amidohydrolase id=4800307 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
amidohydrolase
13_2_20cm_scaffold_2867_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14537..15340
DNA (804bp) protein (268aa)
ABC transporter periplasmic ligand binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Periplasmic binding protein id=5006709 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
periplasmic-binding protein
13_2_20cm_scaffold_2867_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15445..15825
DNA (381bp) protein (127aa)
Putative peptidase TldD id=5006710 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tldD; peptidase TldD Tax=GWA2_Rokubacteria_73_35_curated
tldD; peptidase TldD
Displaying 18 items

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