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13_2_20cm_scaffold_3114

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3114_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1..171
DNA (171bp) protein (57aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176) Tax=GWA2_Rokubacteria_73_35_curated
Putative lipid-transfer protein id=2589435 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium 888 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3114_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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176..682
DNA (507bp) protein (169aa)
Putative uncharacterized protein id=2589434 bin=GWA2_Methylomirabilis_73_35 species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
protein of unknown function DUF35 Tax=GWA2_Rokubacteria_73_35_curated
putative nucleic-acid-binding protein containing a Zn-ribbon
13_2_20cm_scaffold_3114_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(686..1123)
DNA (438bp) protein (146aa)
hypothetical protein id=14627878 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_2_20cm_scaffold_3114_4
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

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comp(1143..2015)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000377418A
Putative ATPase chaperone CoxD {ECO:0000313|EMBL:KGA11165.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
coxD; putative ATPase chaperone CoxD
13_2_20cm_scaffold_3114_5
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2021..3085)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E1B87D rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
hypothetical protein
13_2_20cm_scaffold_3114_6
Pseudomonas sp. GM78, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3082..3954)
DNA (873bp) protein (291aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Pseudomonas sp. GM78 RepID=J3I8H9_9PSED
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJN18203.1}; Flags: Precursor;; TaxID=1144337 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomo
ABC transporter permease
13_2_20cm_scaffold_3114_7
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3958..4656)
DNA (699bp) protein (233aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Pseudomonas sp. GM78 RepID=J2WHG7_9PSED
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curate
ABC transporter family protein
13_2_20cm_scaffold_3114_8
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4676..5428)
DNA (753bp) protein (251aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI0003680E3E
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS42945.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillacea
putative branched-chain amino acid ABC transporter, ATP-binding protein
13_2_20cm_scaffold_3114_9
Pseudomonas sp. GM74, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5432..6772)
DNA (1341bp) protein (447aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Pseudomonas sp. GM74 RepID=J3BIM3_9PSED rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJM86173.1}; Flags: Precursor;; TaxID=1144336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseud
ABC-type branched-chain amino acid transport system, periplasmic component
13_2_20cm_scaffold_3114_10
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(6783..7715)
DNA (933bp) protein (311aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14625207 bin=bin7_NC10_sister species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_3114_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(7768..8268)
DNA (501bp) protein (167aa)
hypothetical protein id=14625206 bin=bin7_NC10_sister species=Sphingomonas sp. TTNP3 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hydroxyquinol 1,2-dioxygenase
13_2_20cm_scaffold_3114_12
unknown

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comp(8361..9134)
DNA (774bp) protein (258aa)

This feature has no annotations

13_2_20cm_scaffold_3114_13

Not on your lists

9281..10669
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00037ABE6F
Uncharacterized protein {ECO:0000313|EMBL:KGA21673.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
hypothetical protein
13_2_20cm_scaffold_3114_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10697..11692
DNA (996bp) protein (332aa)
Luciferase-like monooxygenase id=2589433 bin=GWA2_Methylomirabilis_73_35 species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Luciferase-like monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
Luciferase-like monooxygenase
Displaying 14 items

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