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13_2_20cm_scaffold_3006

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3006_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..234)
DNA (234bp) protein (78aa)
TatD family deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Magnesium-dependent deoxyribonuclease, TatD family, and radical SAM domain iron-sulfur oxidoreductase id=4367866 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TatD family hydrolase
13_2_20cm_scaffold_3006_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(231..644)
DNA (414bp) protein (138aa)
acT domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acT domain-containing protein id=14429420 bin=bin3_NC10 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin3_NC10 organism_group=NC10
acT domain-containing protein
13_2_20cm_scaffold_3006_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(677..1663)
DNA (987bp) protein (329aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4657183 bin=GWA2_Methylomirabilis_73_35 species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_3006_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1688..1942)
DNA (255bp) protein (85aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4657184 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3006_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(1939..3897)
DNA (1959bp) protein (653aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=GWA2_Rokubacteria_73_35_curated
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase id=4657185 bin=GWA2_Methylomirabilis_73_35 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3006_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3894..4754)
DNA (861bp) protein (287aa)
putative PSP1-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
tpl protein id=14626710 bin=bin7_NC10_sister species=Shuttleworthia satelles genus=Shuttleworthia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 rbh
hypothetical protein
13_2_20cm_scaffold_3006_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4765..5703)
DNA (939bp) protein (313aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=GWA2_Rokubacteria_73_35_curated
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta prime subunit id=4657188 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3006_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5693..6313)
DNA (621bp) protein (207aa)
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase id=4657189 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_3006_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6366..6860)
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14625685 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_3006_10
unknown

Not on your lists

7151..7855
DNA (705bp) protein (235aa)

This feature has no annotations

13_2_20cm_scaffold_3006_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7760..8056)
DNA (297bp) protein (99aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4799901 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3006_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8137..8397)
DNA (261bp) protein (87aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=2507307 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
13_2_20cm_scaffold_3006_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8451..9272)
DNA (822bp) protein (274aa)
Putative ABC transporter permease protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFR4_9BACT
ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter permease
13_2_20cm_scaffold_3006_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9269..10141)
DNA (873bp) protein (291aa)
Putative sugar ABC transporter permease n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MV04_CORCM
thuF; putative sugar ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter permease
13_2_20cm_scaffold_3006_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10138..11403)
DNA (1266bp) protein (422aa)
Putative sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFR6_9BACT rbh
sugar ABC transporter periplasmic sugar-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
sugar ABC transporter periplasmic sugar-binding protein
13_2_20cm_scaffold_3006_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11419..12057)
DNA (639bp) protein (213aa)
OmpA/MotB domain protein Tax=GWC2_Rokubacteria_70_16_curated
OmpA/MotB domain protein id=4034147 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
OmpA/MotB domain protein
13_2_20cm_scaffold_3006_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12116..13732)
DNA (1617bp) protein (539aa)
1,4-alpha-glucan branching protein; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
1,4-alpha-glucan branching enzyme GlgB id=4799905 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
trehalose synthase/maltokinase
13_2_20cm_scaffold_3006_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13707..15386)
DNA (1680bp) protein (560aa)
trehalose synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Trehalose synthase id=4882695 bin=GWC2_Methylomirabilis_70_24 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
trehalose synthase
13_2_20cm_scaffold_3006_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(15448..16707)
DNA (1260bp) protein (420aa)
putative glycosyl transferase, family 2 (EC:2.4.-.-)
glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glycosyl transferase, family 2 id=5032667 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3006_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16704..17894)
DNA (1191bp) protein (397aa)
group 1 glycosyl transferase; K13057 trehalose synthase [EC:2.4.1.245] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=5032668 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
13_2_20cm_scaffold_3006_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17891..18556)
DNA (666bp) protein (222aa)
Uncharacterized protein id=5032669 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
cytoplasmic protein
13_2_20cm_scaffold_3006_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18645..19346)
DNA (702bp) protein (234aa)
beta-phosphoglucomutase hydrolase (EC:2.4.1.216) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
beta-phosphoglucomutase hydrolase (EC:2.4.1.216)
Beta-phosphoglucomutase hydrolase id=5032672 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3006_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19349..21622)
DNA (2274bp) protein (758aa)
Alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) id=4183572 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_3006_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21647..21937)
DNA (291bp) protein (97aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=5015981 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3006_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21953..23269)
DNA (1317bp) protein (439aa)
h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2949; ABC transporter periplasmic protein
Displaying 25 items

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