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13_2_20cm_scaffold_3925

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_3925_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2..445
DNA (444bp) protein (148aa)
dihydrouridine synthase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
tRNA-dihydrouridine synthase id=3938344 bin=GWF2_Methylomirabilis_70_14 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA-dihydrouridine synthase
13_2_20cm_scaffold_3925_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

531..1145
DNA (615bp) protein (205aa)
Haloacid dehalogenase-like hydrolase, putative id=4813749 bin=GWA2_Methylomirabilis_73_35 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphatase/phosphohexomutase Tax=GWA2_Rokubacteria_73_35_curated
HAD-superfamily hydrolase
13_2_20cm_scaffold_3925_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1161..1772)
DNA (612bp) protein (204aa)
alanine racemase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Low-specificity threonine aldolase id=4813750 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium FLS18 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alanine racemase domain-containing protein
13_2_20cm_scaffold_3925_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2229..3416
DNA (1188bp) protein (396aa)
sgaA; serine--glyoxylate aminotransferase SgaA (EC:2.6.1.45); K00830 alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51] Tax
sgaA; serine--glyoxylate aminotransferase SgaA (EC:2.6.1.45)
Serine-glyoxylate aminotransferase; Alanine-glyoxylate aminotransferase; Serine-pyruvate aminotransferase id=4813751 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3925_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3394..3729)
DNA (336bp) protein (112aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4766715 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_3925_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3750..4220)
DNA (471bp) protein (157aa)
Putative uncharacterized protein id=4766716 bin=GWA2_Methylomirabilis_73_35 species=Robiginitalea biformata genus=Robiginitalea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_3925_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4225..4923)
DNA (699bp) protein (233aa)
Beta-propeller domain-containing protein, methanol dehydrogenase id=4766717 bin=GWA2_Methylomirabilis_73_35 species=Microvirga sp. WSM3557 genus=Microvirga taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K06872 uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_3925_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4985..5581)
DNA (597bp) protein (199aa)
LemA family protein id=4766718 bin=GWA2_Methylomirabilis_73_35 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LemA family protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_3925_9
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

5721..5852
DNA (132bp) protein (44aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
13_2_20cm_scaffold_3925_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5849..6661
DNA (813bp) protein (271aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2780661 bin=GWA2_Methylomirabilis_73_35 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_2_20cm_scaffold_3925_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6669..8270)
DNA (1602bp) protein (534aa)
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
N-acyl-D-amino-acid deacylase id=4884113 bin=GWC2_Methylomirabilis_70_24 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_2_20cm_scaffold_3925_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8440..9645
DNA (1206bp) protein (402aa)
acyl-CoA dehydrogenase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acyl-CoA dehydrogenase domain protein id=2780651 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
acyl-CoA dehydrogenase domain-containing protein
13_2_20cm_scaffold_3925_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9650..10768
DNA (1119bp) protein (373aa)
acyl-CoA dehydrogenase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acyl-CoA dehydrogenase domain protein id=2780648 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
13_2_20cm_scaffold_3925_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10795..11727
DNA (933bp) protein (311aa)
glucose dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glucose dehydrogenase (GDH) id=2780646 bin=GWA2_Methylomirabilis_73_35 species=Thermoproteus uzoniensis genus=Thermoproteus taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glucose dehydrogenase
Displaying 14 items

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