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13_2_20cm_scaffold_4101

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4101_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..404)
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_4101_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

714..1301
DNA (588bp) protein (196aa)
TetR family transcriptional regulator; K13770 TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, TetR family id=1890906 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TetR family transcriptional regulator
13_2_20cm_scaffold_4101_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1291..2064
DNA (774bp) protein (258aa)
enoyl-CoA hydratase/carnithine racemase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Enoyl-CoA hydratase/isomerase id=1890904 bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase/isomerase
13_2_20cm_scaffold_4101_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2068..2817
DNA (750bp) protein (250aa)
dehydrogenase/reductase 11 (EC:1.1.1.-); K00100 [EC:1.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
dehydrogenase/reductase 11 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) id=3526405 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_2_20cm_scaffold_4101_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2850..3170
DNA (321bp) protein (107aa)
sterol-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative sterol carrier protein id=4320175 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sterol-binding protein
13_2_20cm_scaffold_4101_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3178..4215
DNA (1038bp) protein (346aa)
poly(R)-hydroxyalkanoic acid synthase subunit PhaC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
poly(R)-hydroxyalkanoic acid synthase subunit PhaC id=14626101 bin=bin7_NC10_sister species=Aneurinibacillus aneurinilyticus genus=Aneurinibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
13_2_20cm_scaffold_4101_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4282..4797
DNA (516bp) protein (172aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=3479314 bin=GWC2_Methylomirabilis_70_16 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_2_20cm_scaffold_4101_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4794..5339
DNA (546bp) protein (182aa)
Acyl dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Acyl dehydratase id=3479315 bin=GWC2_Methylomirabilis_70_16 species=Caulobacter sp. genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl dehydratase
13_2_20cm_scaffold_4101_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5317..6060)
DNA (744bp) protein (248aa)
3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
3-oxoacyl-(Acyl-carrier-protein) reductase id=3479316 bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-(acyl-carrier-protein) reductase
13_2_20cm_scaffold_4101_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6176..6691
DNA (516bp) protein (172aa)
polyhydroxyalkanoate synthesis repressor PhaR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Polyhydroxyalkanoate synthesis repressor PhaR id=2278566 bin=GWA2_Elusimicrobia_69_24 species=Sphingobium sp. SYK-6 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
polyhydroxyalkanoate synthesis repressor PhaR
13_2_20cm_scaffold_4101_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6745..7194)
DNA (450bp) protein (150aa)
id=14626096 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
id=14626096 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_2_20cm_scaffold_4101_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

7452..7943
DNA (492bp) protein (164aa)
NlpC/P60 family protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D899_9FIRM
nlp/P60 family protein Tax=RBG_16_Actinobacteria_67_10_curated
Cell wall-associated hydrolases (invasion-associated proteins)
13_2_20cm_scaffold_4101_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7995..9791
DNA (1797bp) protein (599aa)
long-chain fatty acid CoA ligase (AMP-binding) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
AMP-dependent synthetase and ligase id=2278568 bin=GWA2_Elusimicrobia_69_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
long-chain fatty acid--CoA ligase
13_2_20cm_scaffold_4101_14
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

9834..10490
DNA (657bp) protein (219aa)
short-chain dehydrogenase/reductase SDR Tax=GWA2_Elusimicrobia_69_24_curated
Short-chain dehydrogenase/reductase SDR id=3479322 bin=GWC2_Methylomirabilis_70_16 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR
13_2_20cm_scaffold_4101_15
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10606..11313)
DNA (708bp) protein (236aa)
Isoprenyl transferase id=2278581 bin=GWA2_Elusimicrobia_69_24 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
undecaprenyl diphosphate synthase Tax=GWA2_Elusimicrobia_69_24_curated
undecaprenyl diphosphate synthase
13_2_20cm_scaffold_4101_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11393..12397
DNA (1005bp) protein (335aa)
zinc-containing alcohol dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Alcohol dehydrogenase, zinc-containing id=2278573 bin=GWA2_Elusimicrobia_69_24 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
zinc-containing alcohol dehydrogenase
13_2_20cm_scaffold_4101_17
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

12397..12699
DNA (303bp) protein (101aa)
Alpha/beta hydrolase fold protein id=3479511 bin=GWC2_Methylomirabilis_70_16 species=Nostoc sp. PCC 7107 genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alpha/beta fold family hydrolase Tax=GWA2_Elusimicrobia_69_24_curated
alpha/beta hydrolase
Displaying 17 items

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