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13_2_20cm_scaffold_4280

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4280_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3..392
DNA (390bp) protein (130aa)
Putative ABC transporter (Permease proteine) id=3708844 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter permease
13_2_20cm_scaffold_4280_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

398..1693
DNA (1296bp) protein (432aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative Peptidase M16 domain protein, involved in ppq synthesis (PpqG) id=3708843 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_2_20cm_scaffold_4280_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1690..2265
DNA (576bp) protein (192aa)
id=14625060 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14625060 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_4280_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

2338..2841
DNA (504bp) protein (168aa)
hypothetical protein id=14625059 bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein
13_2_20cm_scaffold_4280_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2927..3793
DNA (867bp) protein (289aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4380018 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_4280_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3830..4873)
DNA (1044bp) protein (348aa)
two component, sigma54 specific, Fis family transcriptional regulator id=14627680 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
two component, sigma54 specific, Fis family transcriptional regulator Tax=CSP1_6_Rokubacteria
two component sigma54 specific Fis family transcriptional regulator
13_2_20cm_scaffold_4280_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5049..5414
DNA (366bp) protein (122aa)
signal transduction histidine kinase id=14627691 bin=bin7_NC10_sister species=Desulfovibrio longus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Acetoacetate metabolism regulatory protein AtoC
13_2_20cm_scaffold_4280_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5741..6895
DNA (1155bp) protein (385aa)
qor2; NADPH:quinone reductase (EC:1.6.5.5); K00344 NADPH2:quinone reductase [EC:1.6.5.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Quinone oxidoreductase (NADPH:quinone reductase) id=4380010 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase
13_2_20cm_scaffold_4280_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6877..8115
DNA (1239bp) protein (413aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3) id=14625056 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_4280_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8112..9728
DNA (1617bp) protein (539aa)
AsmA family protein id=4379996 bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AsmA family protein; K07289 AsmA protein Tax=GWA2_Rokubacteria_73_35_curated
AsmA family protein
13_2_20cm_scaffold_4280_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9712..10524)
DNA (813bp) protein (271aa)
UbiE/COQ5 family methlytransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methylase involved in ubiquinone/menaquinone biosynthesis id=4379994 bin=GWA2_Methylomirabilis_73_35 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiE/COQ5 family methlytransferase
13_2_20cm_scaffold_4280_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10600..11730
DNA (1131bp) protein (377aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=GWA2_Rokubacteria_73_35_curated
citrate synthase (EC:2.3.3.1)
Citrate synthase id=4379992 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_2_20cm_scaffold_4280_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11738..12637
DNA (900bp) protein (300aa)
epsH; putative glycosyltransferase EpsH (EC:2.4.-.-)
Glycosyl transferase 2 family protein id=4379990 bin=GWA2_Methylomirabilis_73_35 species=Paenibacillus alvei genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Glycosyl transferase 2 family protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_4280_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12720..13883
DNA (1164bp) protein (388aa)
Oxidoreductase domain protein id=3024538 bin=GWC2_Methylomirabilis_70_16 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
Oxidoreductase domain protein Tax=GWA2_Rokubacteria_73_35_curated
Oxidoreductase domain protein
13_2_20cm_scaffold_4280_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13880..14743
DNA (864bp) protein (288aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase id=3024534 bin=GWC2_Methylomirabilis_70_16 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_2_20cm_scaffold_4280_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

14751..15335
DNA (585bp) protein (195aa)
Putative uncharacterized protein id=4379983 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein; K06966 Tax=GWC2_Rokubacteria_70_16_curated
lysine decarboxylase
13_2_20cm_scaffold_4280_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15361..15759)
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX06918.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_2_20cm_scaffold_4280_18
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15761..16198)
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX06917.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
13_2_20cm_scaffold_4280_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16304..17098)
DNA (795bp) protein (265aa)
Alcohol dehydrogenase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D7L4_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:ETX03295.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
alcohol dehydrogenase
Displaying 19 items

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