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13_2_20cm_scaffold_4465

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4465_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..1135
DNA (1134bp) protein (378aa)
gamma-glutamyltranspeptidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative gamma-glutamyltranspeptidase id=2304933 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gamma-glutamyltranspeptidase
13_2_20cm_scaffold_4465_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1259..1702)
DNA (444bp) protein (148aa)
Putative MaoC-like dehydratase id=4231328 bin=GWC2_Methylomirabilis_70_24 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative MaoC-like dehydratase Tax=GWA2_Rokubacteria_70_23_curated
putative MaoC-like dehydratase
13_2_20cm_scaffold_4465_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1705..2982)
DNA (1278bp) protein (426aa)
Major facilitator superfamily MFS_1 id=2304903 bin=GWA2_Methylomirabilis_73_35 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
sugar phosphate permease Tax=GWA2_Rokubacteria_73_35_curated
sugar phosphate permease
13_2_20cm_scaffold_4465_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3033..3737)
DNA (705bp) protein (235aa)
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB id=14628005 bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=CSP1_6_Rokubacteria
ATP-dependent chaperone ClpB
13_2_20cm_scaffold_4465_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3734..5557)
DNA (1824bp) protein (608aa)
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB id=14628005 bin=bin7_NC10_sister species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin7_NC10_sister organism_group=NC10
clpB; chaperone
13_2_20cm_scaffold_4465_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5565..6575)
DNA (1011bp) protein (337aa)
chaperone DnaJ domain-containing protein; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chaperone protein DnaJ id=3111262 bin=GWC2_Methylomirabilis_70_16 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
chaperone DnaJ domain-containing protein
13_2_20cm_scaffold_4465_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(6725..8212)
DNA (1488bp) protein (496aa)
protease Do (EC:3.4.21.108) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
trypsin domain/PDZ domain-containing protein; K01362 [EC:3.4.21.-] id=14627773 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
degP-2; periplasmic trypsin-like serine protease lipoprotein DegP
13_2_20cm_scaffold_4465_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8229..9614)
DNA (1386bp) protein (462aa)
ftsH; cell division protein FtsH (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATP-dependent zinc metalloprotease FtsH id=4083696 bin=GWA2_Methylomirabilis_73_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ftsH; cell division protein FtsH
Displaying 8 items

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