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13_2_20cm_scaffold_4828

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_4828_1
unknown

Not on your lists

comp(3..188)
DNA (186bp) protein (62aa)

This feature has no annotations

13_2_20cm_scaffold_4828_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(669..1325)
DNA (657bp) protein (219aa)
Uncharacterized protein id=4367554 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_2_20cm_scaffold_4828_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1328..1597)
DNA (270bp) protein (90aa)
hypothetical protein id=4367555 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_2_20cm_scaffold_4828_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1600..2004)
DNA (405bp) protein (135aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4367556 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_4828_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2006..2290)
DNA (285bp) protein (95aa)
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
RNA polymerase, sigma-24 subunit, ECF subfamily id=4367557 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA polymerase sigma factor
13_2_20cm_scaffold_4828_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2283..2534)
DNA (252bp) protein (84aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14627622 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_4828_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2631..3275)
DNA (645bp) protein (215aa)
hypothetical protein Magn03010940 id=2513754 bin=GWC2_Methylomirabilis_70_24 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_2_20cm_scaffold_4828_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3389..4561)
DNA (1173bp) protein (391aa)
Peptidase M24 id=4367559 bin=GWA2_Methylomirabilis_73_35 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M24 Tax=GWA2_Rokubacteria_73_35_curated
peptidase M24
13_2_20cm_scaffold_4828_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4620..5384)
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR id=4367560 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
short-chain dehydrogenase/reductase SDR Tax=GWA2_Rokubacteria_73_35_curated
short-chain dehydrogenase/reductase SDR
13_2_20cm_scaffold_4828_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5493..6380)
DNA (888bp) protein (296aa)
ParB domain protein nuclease id=4367561 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_2_20cm_scaffold_4828_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6381..7379)
DNA (999bp) protein (333aa)
ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter permease id=4851648 bin=GWC2_Methylomirabilis_70_24 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter permease
13_2_20cm_scaffold_4828_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7376..7999)
DNA (624bp) protein (208aa)
ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
ABC transporter permease id=3784117 bin=GWC2_Methylomirabilis_70_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease
Displaying 12 items

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