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13_2_20cm_scaffold_5443

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5443_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3..356)
DNA (354bp) protein (118aa)
hypothetical protein; K07027 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=2513752 bin=GWC2_Methylomirabilis_70_24 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_5443_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(422..1480)
DNA (1059bp) protein (353aa)
thrC_2; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
L-threonine synthase (EC:4.2.3.1) id=14627619 bin=bin7_NC10_sister species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin7_NC10_sister organism_group=NC10
thrC_2; threonine synthase (EC:4.2.3.1)
13_2_20cm_scaffold_5443_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1477..2784)
DNA (1308bp) protein (436aa)
hom; homoserine dehydrogenase (EC:1.1.1.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
homoserine dehydrogenase (HDH): ThrA, MetL (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] id=14627618 bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hom; homoserine dehydrogenase (EC:1.1.1.3)
13_2_20cm_scaffold_5443_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2816..3985)
DNA (1170bp) protein (390aa)
PLP-dependent aminotransferase, putative aspartate aminotransferase (EC:2.6.1.- 2.6.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLP-dependent aminotransferase, putative aspartate aminotransferase (EC:2.6.1.- 2.6.1.1) id=14627617 bin=bin7_NC10_sister species=Thioalkalivibrio sp. ALSr1 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
class I and II aminotransferase
13_2_20cm_scaffold_5443_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4294..5166
DNA (873bp) protein (291aa)
M23 peptidase domain-containing protein (EC:3.4.24.-)
peptidase M23B Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
peptidase M23 id=14627438 bin=bin7_NC10_sister species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_2_20cm_scaffold_5443_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5367..6353)
DNA (987bp) protein (329aa)
oppF; oligopeptide ABC transporter ATP-binding protein (EC:3.6.3.27); K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
peptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein id=14627442 bin=bin7_NC10_sister species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
peptide ABC transporter ATP-binding protein
13_2_20cm_scaffold_5443_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6362..7282)
DNA (921bp) protein (307aa)
oppD; peptide ABC transporter ATP-binding protein (EC:3.6.3.24); K02031 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptide ABC transporter ATP-binding protein id=3311241 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oligopeptide ABC transporter ATP-binding protein
13_2_20cm_scaffold_5443_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7411..8403)
DNA (993bp) protein (331aa)
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] id=14627445 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
threonine aldolase
13_2_20cm_scaffold_5443_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9280..10533
DNA (1254bp) protein (418aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2868867 bin=GWC2_Methylomirabilis_70_24 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_5443_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10802..11782
DNA (981bp) protein (327aa)
multidrug resistance efflux pump Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Secretion protein HlyD family protein id=4213646 bin=GWA2_Methylomirabilis_73_35 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multidrug resistance efflux pump
13_2_20cm_scaffold_5443_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11779..13437
DNA (1659bp) protein (553aa)
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B Tax=GWA2_Rokubacteria_73_35_curated
Drug resistance transporter, EmrB/QacA subfamily id=4748857 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
RND family multidrug resistance efflux pump inner membrane protein EmrB
13_2_20cm_scaffold_5443_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(13585..14028)
DNA (444bp) protein (148aa)
signal-transduction protein with CBS domains id=14626376 bin=bin7_NC10_sister species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin7_NC10_sister organism_group=NC10
signal-transduction protein with CBS domains Tax=CSP1_6_Rokubacteria
signal-transduction protein with CBS domains
13_2_20cm_scaffold_5443_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14146..15327
DNA (1182bp) protein (394aa)
Peptidase M24 n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SYC6_PSYIN
peptidase M24 Tax=GWA2_Rokubacteria_73_35_curated
peptidase M24
Displaying 13 items

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