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13_2_20cm_scaffold_6774

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_6774_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3..482)
DNA (480bp) protein (160aa)
Histidinol-phosphate transaminase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hisC; putative aminotransferase (EC:2.6.1.9)
Histidinol-phosphate transaminase n=1 Tax=Pseudomonas aeruginosa PAK RepID=S0IK43_PSEAI
13_2_20cm_scaffold_6774_2
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(502..2310)
DNA (1809bp) protein (603aa)
Glr2171 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NIL2_GLOVI
hypothetical protein
Glr2171 protein {ECO:0000313|EMBL:BAC90112.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
13_2_20cm_scaffold_6774_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2307..2555)
DNA (249bp) protein (83aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_2_20cm_scaffold_6774_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2570..3196)
DNA (627bp) protein (209aa)
organic solvent tolerance ABC transporter, periplasmic substrate-binding protein; K07323 putative toluene tolerance protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Organic solvent tolerance ABC transporter, periplasmic substrate-binding protein id=4998226 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_6774_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3483..3608
DNA (126bp) protein (42aa)
major facilitator transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_2_20cm_scaffold_6774_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3605..4711
DNA (1107bp) protein (369aa)
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein id=14625100 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
13_2_20cm_scaffold_6774_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4719..5483)
DNA (765bp) protein (255aa)
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative beta-lactamase-like protein id=4780187 bin=GWA2_Methylomirabilis_73_35 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-lactamase domain-containing protein
13_2_20cm_scaffold_6774_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5525..6196
DNA (672bp) protein (224aa)
methyltransferase cognate corrinoid protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methyltransferase cognate corrinoid protein id=14625094 bin=bin7_NC10_sister species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
methyltransferase cognate corrinoid protein
13_2_20cm_scaffold_6774_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6193..7143
DNA (951bp) protein (317aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Homocysteine S-methyltransferase id=4780181 bin=GWA2_Methylomirabilis_73_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_2_20cm_scaffold_6774_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7172..7960
DNA (789bp) protein (263aa)
Vitamin B12 dependent methionine synthase activation region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Vitamin B12 dependent methionine synthase id=4780179 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Vitamin B12 dependent methionine synthase activation subunit
13_2_20cm_scaffold_6774_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8129..8653
DNA (525bp) protein (175aa)
shikimate dehydrogenase (EC:1.1.1.25) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-dehydroquinate synthase (EC:4.2.3.4)
Shikimate kinase id=4780140 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_6774_12
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

8637..10487
DNA (1851bp) protein (617aa)
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase; K00547 homocysteine S-methyltransferase [EC:2.1.1.10] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase; K00547 homocysteine S-methyltransferase [EC:2.1.1.10] id=14625090 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10 rbh
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase
13_2_20cm_scaffold_6774_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10538..12388
DNA (1851bp) protein (617aa)
Amidase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Amidase id=5037265 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Amidase
Displaying 13 items

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