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13_2_20cm_scaffold_792

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_792_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..415
DNA (414bp) protein (138aa)
Quinolinate phosphoribosyl transferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative nicotinate phosphoribosyltransferase (EC:6.3.4.21)
Quinolinate phosphoribosyl transferase id=4059715 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_792_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

442..1215
DNA (774bp) protein (258aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
indole-3-glycerol phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase id=4059714 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_792_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1306..1953
DNA (648bp) protein (216aa)
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC:5.3.1.24) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase id=4059713 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_792_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1950..3134
DNA (1185bp) protein (395aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20) Tax=GWA2_Rokubacteria_73_35_curated
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain id=4059712 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_2_20cm_scaffold_792_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3135..3953
DNA (819bp) protein (273aa)
tryptophan synthase subunit alpha; K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=GWA2_Rokubacteria_73_35_curated
Tryptophan synthase alpha chain id=4059711 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
tryptophan synthase subunit alpha
13_2_20cm_scaffold_792_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4051..4911
DNA (861bp) protein (287aa)
accD; acetyl-CoA carboxylase carboxyltransferase subunit beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta id=4811711 bin=GWC2_Methylomirabilis_70_24 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
acetyl-CoA carboxyl transferase
13_2_20cm_scaffold_792_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5075..6385
DNA (1311bp) protein (437aa)
folyl-polyglutamate synthetase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
FolC bifunctional protein id=4811710 bin=GWC2_Methylomirabilis_70_24 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
13_2_20cm_scaffold_792_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6406..8613
DNA (2208bp) protein (736aa)
organic solvent tolerance protein; K04744 LPS-assembly protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
organic solvent tolerance protein; K04744 LPS-assembly protein id=14627077 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
organic solvent tolerance protein
13_2_20cm_scaffold_792_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8610..9704
DNA (1095bp) protein (365aa)
DegT/DnrJ/EryC1/StrS aminotransferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DegT/DnrJ/EryC1/StrS family protein id=14627076 bin=bin7_NC10_sister species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
13_2_20cm_scaffold_792_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9701..11011
DNA (1311bp) protein (437aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
nucleotide sugar dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Nucleotide-sugar dehydrogenase id=4811707 bin=GWC2_Methylomirabilis_70_24 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
13_2_20cm_scaffold_792_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11127..12068
DNA (942bp) protein (314aa)
glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glutamate--tRNA ligase id=4756400 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutamyl-tRNA synthetase
Displaying 11 items

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