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13_2_20cm_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 56 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_101_1
unknown

Not on your lists

comp(996..1193)
DNA (198bp) protein (66aa)

This feature has no annotations

13_2_20cm_scaffold_101_2
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2055..2444
DNA (390bp) protein (130aa)
Putative lipoprotein n=1 Tax=Haemophilus haemolyticus M21639 RepID=F9H8G2_HAEHA
hypothetical protein
Putative lipoprotein {ECO:0000313|EMBL:EGT78773.1}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolytic
13_2_20cm_scaffold_101_3
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3484..4182
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4P104_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ79030.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
TonB family protein
13_2_20cm_scaffold_101_4
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4450..10638
DNA (6189bp) protein (2063aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T3U0_9GAMM rbh
RHS Repeat family protein
RHS Repeat family protein {ECO:0000313|EMBL:CDG81972.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinoba
13_2_20cm_scaffold_101_5
unknown

Not on your lists

10638..11051
DNA (414bp) protein (138aa)

This feature has no annotations

13_2_20cm_scaffold_101_6
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11266..12237)
DNA (972bp) protein (324aa)
Uncharacterized protein {ECO:0000313|EMBL:EWY37482.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella sti
13_2_20cm_scaffold_101_7
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12751..14415)
DNA (1665bp) protein (555aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000255|HAMAP-Rule:MF_00344}; EC=6.3.5.2 {ECO:0000255|HAMAP-Rule:MF_00344};; GMP synthetase {ECO:0000255|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=GUAA_ALKEH rbh
13_2_20cm_scaffold_101_8
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14424..15890)
DNA (1467bp) protein (489aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.37)
inosine 5''''-monophosphate dehydrogenase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036B540B rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
13_2_20cm_scaffold_101_9
unknown

Not on your lists

comp(16044..16688)
DNA (645bp) protein (215aa)

This feature has no annotations

13_2_20cm_scaffold_101_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16775..18421)
DNA (1647bp) protein (549aa)
Peptidase M28 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFE1_RHOM4 rbh
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ACY49397.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strai
13_2_20cm_scaffold_101_11
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18566..19942
DNA (1377bp) protein (459aa)
exodeoxyribonuclease VII (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=EX7L_THISH
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_2_20cm_scaffold_101_12
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19944..20855
DNA (912bp) protein (304aa)
Peptidase M23 n=2 Tax=Thauera RepID=C4KDJ2_THASP
Peptidase M23 family protein {ECO:0000313|EMBL:KIN90875.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
peptidase M23
13_2_20cm_scaffold_101_13
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20842..21309
DNA (468bp) protein (156aa)
CMP/dCMP deaminase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
bifunctional haloalkane dehalogenase/tRNA-specific adenosine deaminase id=5081048 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
CMP/dCMP deaminase, zinc-binding protein
13_2_20cm_scaffold_101_14
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21383..22783)
DNA (1401bp) protein (467aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00176609}; EC=4.2.2.n1 {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00166192};; Murein l
Membrane-bound lytic murein transglycosylase F n=1 Tax=Pseudomonas mendocina DLHK RepID=J7SMC6_PSEME rbh
Membrane-bound lytic murein transglycosylase F
13_2_20cm_scaffold_101_15

Not on your lists

comp(22988..24238)
DNA (1251bp) protein (417aa)
FHA domain-containing protein n=1 Tax=mine drainage metagenome RepID=T1C9T5_9ZZZZ
FHA domain-containing protein {ECO:0000313|EMBL:EQD77928.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
type VI secretion protein Fha1
13_2_20cm_scaffold_101_16
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24370..24711
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BU50_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR20724.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
hypothetical protein
13_2_20cm_scaffold_101_17
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24708..28625
DNA (3918bp) protein (1306aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BUK9_9GAMM rbh
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule
13_2_20cm_scaffold_101_18

Not on your lists

comp(28699..29499)
DNA (801bp) protein (267aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM01543.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_2_20cm_scaffold_101_19
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29600..31114)
DNA (1515bp) protein (505aa)
virulence factor family protein id=12494610 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
virulence factor family protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
virulence factor family protein
13_2_20cm_scaffold_101_20
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31111..33699)
DNA (2589bp) protein (863aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A7F66 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIT71018.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
hypothetical protein
13_2_20cm_scaffold_101_21
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33717..35390)
DNA (1674bp) protein (558aa)
ABC transporter related protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C150_NITHN rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADE14607.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus
13_2_20cm_scaffold_101_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35512..36447
DNA (936bp) protein (312aa)
Histone deacetylase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K7M9_NITWC rbh
histone deacetylase; K04768 acetoin utilization protein AcuC Tax=RBG_16_Gamma2_65_34_curated
histone deacetylase
13_2_20cm_scaffold_101_23
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36457..37713
DNA (1257bp) protein (419aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000255|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000255|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000255|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000255|HAM
serine hydroxymethyltransferase n=1 Tax=Arhodomonas aquaeolei RepID=UPI000360360F rbh
13_2_20cm_scaffold_101_24

Not on your lists

37736..38320
DNA (585bp) protein (195aa)
Ribonucleotide reductase regulator NrdR-like protein n=1 Tax=mine drainage metagenome RepID=T1CBW7_9ZZZZ
Ribonucleotide reductase regulator NrdR-like protein {ECO:0000313|EMBL:EQD79762.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenom
nrdR; transcriptional regulator NrdR
13_2_20cm_scaffold_101_25
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38352..39521
DNA (1170bp) protein (390aa)
ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DLV5_9GAMM
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" sou
13_2_20cm_scaffold_101_26
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39610..40149
DNA (540bp) protein (180aa)
Riboflavin synthase, alpha subunit n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1H7_9GAMM
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EIC22526.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodo
riboflavin synthase subunit alpha
13_2_20cm_scaffold_101_27
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40218..41753)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003825BDC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH96989.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_2_20cm_scaffold_101_28
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(41848..44340)
DNA (2493bp) protein (831aa)
Cna B domain-containing protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SBR9_9BACT
Cna B domain-containing protein {ECO:0000313|EMBL:BAL53605.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
hypothetical protein
13_2_20cm_scaffold_101_29
unknown

Not on your lists

comp(44354..44476)
DNA (123bp) protein (41aa)

This feature has no annotations

13_2_20cm_scaffold_101_30
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(44983..47001)
DNA (2019bp) protein (673aa)
cell surface receptor IPT/TIG domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
Fibronectin type III domain protein id=4056908 bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
cell surface receptor IPT/TIG domain-containing protein
Displaying items 1-30 of 56 in total

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