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13_2_20cm_scaffold_1345

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1345_1
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..2173)
DNA (2172bp) protein (724aa)
mrcB; peptidoglycan synthetase; penicillin-binding protein 1B; K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-] Tax=RBG_16_Gamma2_60_9_curated
Penicillin-binding protein 1B n=1 Tax=Pseudomonas aeruginosa ATCC 14886 RepID=K1BP62_PSEAI rbh
penicillin-binding protein 1B
13_2_20cm_scaffold_1345_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2221..4809)
DNA (2589bp) protein (863aa)
Aspartate kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJ84_RHOM4 rbh
aspartate kinase
Aspartate kinase {ECO:0000313|EMBL:ACY48542.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (st
13_2_20cm_scaffold_1345_3
unknown

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comp(4909..5124)
DNA (216bp) protein (72aa)

This feature has no annotations

13_2_20cm_scaffold_1345_4
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5358..6170)
DNA (813bp) protein (271aa)
Protein containing DUF62 (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZUX2_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein
13_2_20cm_scaffold_1345_5

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comp(6208..6636)
DNA (429bp) protein (143aa)
DnaK suppressor protein n=1 Tax=mine drainage metagenome RepID=T0YEH7_9ZZZZ
DnaK suppressor protein {ECO:0000313|EMBL:EQD30232.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
TraR/DksA family transcriptional regulator
13_2_20cm_scaffold_1345_6
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6597..7727)
DNA (1131bp) protein (377aa)
transaldolase (EC:2.2.1.2) Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00035F3279
transaldolase
13_2_20cm_scaffold_1345_7
Pseudomonas sp. GM49, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7834..8127
DNA (294bp) protein (98aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJM75328.1}; TaxID=1144331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G
13_2_20cm_scaffold_1345_8

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8127..8495
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PS09_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH97715.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
membrane protein
13_2_20cm_scaffold_1345_9
unknown

Not on your lists

8492..8878
DNA (387bp) protein (129aa)

This feature has no annotations

13_2_20cm_scaffold_1345_10
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8912..9913)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI00031EDE27
hypothetical protein Tax=RBG_16_Gamma2_64_11_curated
ErfK/YbiS/YcfS/YnhG family protein
13_2_20cm_scaffold_1345_11
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

10036..10617
DNA (582bp) protein (194aa)
DNA-3-methyladenine glycosylase Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
Putative 3-methyladenine DNA glycosylase id=4439994 bin=GWC2_Nitrospirae-rel_56_14 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
DNA-3-methyladenine glycosylase
13_2_20cm_scaffold_1345_12
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10726..11433
DNA (708bp) protein (236aa)
Thiol:disulfide interchange protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPS6_ACCPU
DSBA oxidoreductase
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; Flags: Precursor;; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candid
13_2_20cm_scaffold_1345_13
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11473..11781)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Oligella ureolytica RepID=UPI000377E7B4
Acetyl/propionyl-CoA carboxylase, alpha chain
Tax=BJP_08E140C01_Dechloromonas_61_78
13_2_20cm_scaffold_1345_14
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11759..13405)
DNA (1647bp) protein (549aa)
mccC1; methylcrotonyl-CoA carboxylase biotin-containing subunit (EC:6.4.1.4); K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
mccA; 3-methylcrotonoyl-CoA carboxylase, alpha subunit MccA (EC:6.4.1.4)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLQ4_9BURK
13_2_20cm_scaffold_1345_15

Not on your lists

comp(13429..15033)
DNA (1605bp) protein (535aa)
Carboxyl transferase n=1 Tax=uncultured organism RepID=Q1EHZ6_9ZZZZ
Carboxyl transferase {ECO:0000313|EMBL:CAK32543.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
methylcrotonoyl-CoA carboxylase
13_2_20cm_scaffold_1345_16
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15101..16273
DNA (1173bp) protein (391aa)
Acyl-CoA dehydrogenase domain protein n=2 Tax=Ochrobactrum intermedium RepID=C4WES8_9RHIZ
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EEQ94713.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactru
acyl-CoA dehydrogenase domain-containing protein
13_2_20cm_scaffold_1345_17

Not on your lists

16270..16686
DNA (417bp) protein (139aa)
GntR domain-containing protein n=1 Tax=mine drainage metagenome RepID=T1DG67_9ZZZZ
GntR domain-containing protein {ECO:0000313|EMBL:EQD80870.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying 17 items

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