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13_2_20cm_scaffold_1473

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1473_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1285
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030326D1
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:AIF45808.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
13_2_20cm_scaffold_1473_2
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1295..3730
DNA (2436bp) protein (812aa)
Glycine cleavage system protein T n=2 Tax=Labrenzia RepID=U7FLX3_9RHOB rbh
Glycine cleavage system protein T {ECO:0000313|EMBL:ERP85893.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia
glycine cleavage system T protein (aminomethyltransferase)
13_2_20cm_scaffold_1473_3
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3806..4255)
DNA (450bp) protein (150aa)
MaoC family dehydratase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QX63_RALPI
Acyl dehydratase {ECO:0000313|EMBL:CDY74318.1}; Nodulation protein NodN {ECO:0000313|EMBL:KDR43968.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiac
MaoC family dehydratase
13_2_20cm_scaffold_1473_4
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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4395..5351
DNA (957bp) protein (319aa)
Putative oxidoreductase, NAD(P)-binding domain {ECO:0000313|EMBL:CAJ60490.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAJ60490.1};; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Franki
Putative oxidoreductase, NAD(P)-binding domain n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RPP1_FRAAA
oxidoreductase NAD(P)-binding subunit
13_2_20cm_scaffold_1473_5
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5427..5780)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039D5219
Uncharacterized protein {ECO:0000313|EMBL:KKC26986.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
13_2_20cm_scaffold_1473_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6076..7350
DNA (1275bp) protein (425aa)
Signal transduction histidine kinase LytS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU49_9GAMM
histidine kinase internal region
Histidine kinase internal region {ECO:0000313|EMBL:AHG92438.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_1473_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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7350..8135
DNA (786bp) protein (262aa)
DNA-binding response regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2T8_MYXSD
DNA-binding response regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
LytTr DNA-binding region
13_2_20cm_scaffold_1473_8

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8188..9462
DNA (1275bp) protein (425aa)
Major facilitator superfamily transporter (Fragment) n=1 Tax=mine drainage metagenome RepID=T1A428_9ZZZZ
Major facilitator superfamily transporter {ECO:0000313|EMBL:EQD35639.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage me
major facilitator superfamily transporter
13_2_20cm_scaffold_1473_9
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9459..10046
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037A6D79
Uncharacterized protein {ECO:0000313|EMBL:GAO37843.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
13_2_20cm_scaffold_1473_10
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10156..10425)
DNA (270bp) protein (90aa)
Ferredoxin--NADP+ reductase {ECO:0000313|EMBL:CDI02933.1}; EC=1.18.1.2 {ECO:0000313|EMBL:CDI02933.1};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candida
fpr1; ferredoxin-NADP+ reductase (EC:1.18.1.2)
Ferredoxin-NADP+ reductase n=1 Tax=mine drainage metagenome RepID=T0YWN3_9ZZZZ
13_2_20cm_scaffold_1473_11

Not on your lists

comp(10392..10838)
DNA (447bp) protein (149aa)
Ferredoxin-NADP+ reductase (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZU83_9ZZZZ
Ferredoxin-NADP+ reductase {ECO:0000313|EMBL:EQD48132.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
13_2_20cm_scaffold_1473_12
unknown

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11020..11793
DNA (774bp) protein (258aa)

This feature has no annotations

13_2_20cm_scaffold_1473_13
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11816..12703)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037D7668
Uncharacterized protein {ECO:0000313|EMBL:AKH21047.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
13_2_20cm_scaffold_1473_14
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12700..13167)
DNA (468bp) protein (156aa)
LemA family protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DTB8_PSEMN
LemA family protein
LemA family protein {ECO:0000313|EMBL:AEB59684.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mendocina
Displaying 14 items

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