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13_2_20cm_scaffold_1538

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1538_1
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13..1245)
DNA (1233bp) protein (411aa)
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B75CBE
Membrane protein {ECO:0000313|EMBL:EGD58441.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nit
major facilitator superfamily transporter
13_2_20cm_scaffold_1538_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1278..3065)
DNA (1788bp) protein (596aa)
N-acyl-D-amino-acid deacylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9B2_PHEZH rbh
aminoacylase
Aminoacylase {ECO:0000313|EMBL:AHX14775.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
13_2_20cm_scaffold_1538_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3210..4832)
DNA (1623bp) protein (541aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RBG_16_Betaproteobacteria_64_18_curated
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9NHM4_RHILT rbh
hypothetical protein
13_2_20cm_scaffold_1538_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(4876..6477)
DNA (1602bp) protein (534aa)
FAD dependent oxidoreductase Tax=RBG_16_Chloroflexi_63_12_curated
FAD dependent oxidoreductase id=14631624 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
amine oxidase
13_2_20cm_scaffold_1538_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6474..8075)
DNA (1602bp) protein (534aa)
FAD dependent oxidoreductase n=1 Tax=bacterium symbiont of Plakortis simplex pPS11G3 RepID=V5JB99_9BACT
FAD dependent oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FAD dependent oxidoreductase
13_2_20cm_scaffold_1538_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8078..9265)
DNA (1188bp) protein (396aa)
glycine cleavage T protein (aminomethyl transferase); K00605 aminomethyltransferase [EC:2.1.2.10] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI00035EAA9A rbh
glycine cleavage T protein (aminomethyl transferase)
13_2_20cm_scaffold_1538_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9714..11303
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B6F7F0
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
sensor histidine kinase
13_2_20cm_scaffold_1538_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11554..13851
DNA (2298bp) protein (766aa)
Response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1L8_9BURK
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
13_2_20cm_scaffold_1538_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14098..14436
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=2 Tax=Alicycliphilus denitrificans RepID=E8TTU6_ALIDB
nitrogen regulatory protein p-ii
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:GAO25945.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
13_2_20cm_scaffold_1538_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14472..15887
DNA (1416bp) protein (472aa)
Ammonium transporter n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q146C8_BURXL
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. N
amt; ammonium transporter family protein
13_2_20cm_scaffold_1538_11

Not on your lists

15965..17203
DNA (1239bp) protein (413aa)
Putative porin n=1 Tax=mine drainage metagenome RepID=E6QTZ1_9ZZZZ rbh
Putative porin {ECO:0000313|EMBL:CBI10713.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative porin
13_2_20cm_scaffold_1538_12
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17483..18871)
DNA (1389bp) protein (463aa)
TonB-dependent outer membrane receptor n=2 Tax=mine drainage metagenome RepID=T1C5G2_9ZZZZ rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
TonB-dependent receptor
13_2_20cm_scaffold_1538_13
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18829..20361)
DNA (1533bp) protein (511aa)
TonB-denpendent receptor n=1 Tax=Kangiella aquimarina RepID=UPI0003756892 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN49079.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
Outer membrane cobalamin receptor protein
13_2_20cm_scaffold_1538_14
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21008..22261
DNA (1254bp) protein (418aa)
Putative aspartyl/asparaginyl beta-hydroxylase {ECO:0000313|EMBL:EED31885.1}; EC=1.14.11.16 {ECO:0000313|EMBL:EED31885.1};; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" sourc
Putative aspartyl/asparaginyl beta-hydroxylase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KLB8_9GAMM
TPR repeat protein
13_2_20cm_scaffold_1538_15
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22268..23692)
DNA (1425bp) protein (475aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase 1 {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase 1 {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS 1 {ECO:0000255|HAM
Glutamate--tRNA ligase 1 n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=SYE1_ALKEH
Displaying 15 items

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