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13_2_20cm_scaffold_1937

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1937_1
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(169..801)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000366B2A8
hypothetical protein Tax=RBG_16_Gammaproteobacteria_51_14_curated
hypothetical protein
13_2_20cm_scaffold_1937_2
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(798..1964)
DNA (1167bp) protein (389aa)
Aspartate tRNA synthetase {ECO:0000313|EMBL:CDH44148.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CDH44148.1};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatu
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BND1_9GAMM
13_2_20cm_scaffold_1937_3

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comp(1964..2530)
DNA (567bp) protein (189aa)
Aspartyl-tRNA synthetase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1C5N5_9ZZZZ
Suspect SCG annotation. See neighboring gene [13_2_20cm_scaffold_1937_2].
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EQD61425.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
aspartyl-tRNA synthetase
13_2_20cm_scaffold_1937_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2580..3590)
DNA (1011bp) protein (337aa)
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7L2_ALIDK
zinc-binding alcohol dehydrogenase family protein
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:AEB86609.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;"
13_2_20cm_scaffold_1937_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3631..4263)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY06_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95329.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacil
13_2_20cm_scaffold_1937_6
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4293..4775)
DNA (483bp) protein (161aa)
Regulatory protein, FmdB family n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K9S5_NITWC
FmdB family regulatory protein
Regulatory protein, FmdB family {ECO:0000313|EMBL:ADJ27364.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus
13_2_20cm_scaffold_1937_7
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4870..7467)
DNA (2598bp) protein (866aa)
ATP-dependent chaperone ClpB n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GN47_THISH rbh
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkal
ATP-dependent chaperone ClpB
13_2_20cm_scaffold_1937_8
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7600..9504)
DNA (1905bp) protein (635aa)
SEC-C motif domain protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SJW7_GALCS rbh
SEC-C motif domain-containing protein Tax=GWA2_Gallionellales_60_18_curated
SEC-C motif domain-containing protein
13_2_20cm_scaffold_1937_9
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9645..10469)
DNA (825bp) protein (275aa)
Zinc transporter, ZIP family n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XLI5_METNJ
Zinc transporter, ZIP family
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_2_20cm_scaffold_1937_10
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10561..11292)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00037F3FD0
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
13_2_20cm_scaffold_1937_11
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11328..12347)
DNA (1020bp) protein (340aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00038023CF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH20515.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
13_2_20cm_scaffold_1937_12
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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12366..13148
DNA (783bp) protein (261aa)
Lipoprotein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BW64_9GAMM
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of uniden
bamD; putative outer membrane protein biogenesis protein BamD
13_2_20cm_scaffold_1937_13
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13145..14773)
DNA (1629bp) protein (543aa)
NAD+ synthetase (EC:6.3.5.1)
NAD synthetase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037AD986 rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
Displaying 13 items

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