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13_2_20cm_scaffold_1948

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1948_1

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1..1140
DNA (1140bp) protein (380aa)
TonB family protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1ATY7_9ZZZZ
TonB family protein {ECO:0000313|EMBL:EQD45490.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
tetratricopeptide repeat-containing protein
13_2_20cm_scaffold_1948_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1172..2641)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029B1ACD rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY19125.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_2_20cm_scaffold_1948_3
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3400..4008
DNA (609bp) protein (203aa)
Gst n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PLU0_9BURK
Gst
Gst {ECO:0000313|EMBL:AHB04278.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
13_2_20cm_scaffold_1948_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4106..4306
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7VWN5_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP80753.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
hypothetical protein
13_2_20cm_scaffold_1948_5
unknown

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4323..4610
DNA (288bp) protein (96aa)

This feature has no annotations

13_2_20cm_scaffold_1948_6
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4607..6754)
DNA (2148bp) protein (716aa)
RNA polymerase sigma factor RpoD n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000368A0EB rbh
RNA polymerase sigma-70 subunit RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=523791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
13_2_20cm_scaffold_1948_7
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6877..8700)
DNA (1824bp) protein (608aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
DNA primase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BR57_9GAMM rbh
DNA primase, catalytic core
13_2_20cm_scaffold_1948_8

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comp(8734..9177)
DNA (444bp) protein (148aa)
GatB/Yqey domain-containing protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZFP5_9ZZZZ
GatB/Yqey domain-containing protein {ECO:0000313|EMBL:EQD27709.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metageno
hypothetical protein
13_2_20cm_scaffold_1948_9

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comp(9194..9403)
DNA (210bp) protein (70aa)
Ribosomal protein S21 n=2 Tax=mine drainage metagenome RepID=T1AIA5_9ZZZZ
Ribosomal protein S21 {ECO:0000313|EMBL:EQD57007.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rpsU; 30S ribosomal protein S21
Displaying 9 items

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