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13_2_20cm_scaffold_2004

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2004_1
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..268
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003792D23
Uncharacterized protein {ECO:0000313|EMBL:EIT70392.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
13_2_20cm_scaffold_2004_2
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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265..1380
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00035E8566
ABC transporter permease {ECO:0000313|EMBL:EIT70393.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarbon
ABC-type antimicrobial peptide transport system
13_2_20cm_scaffold_2004_3
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

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1383..2714
DNA (1332bp) protein (444aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KM24_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED31074.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
hypothetical protein
13_2_20cm_scaffold_2004_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2680..5382)
DNA (2703bp) protein (901aa)
Putative signaling protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5B4_GEMAT
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AHG87841.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_2_20cm_scaffold_2004_5
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5675..6535
DNA (861bp) protein (287aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Caulobacter sp. AP07 RepID=J3ARN6_9CAUL
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJL36476.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;"
AraC family transcriptional regulator
13_2_20cm_scaffold_2004_6
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6520..7602
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000380071A rbh
Hydrolase beta-lactamase-like protein {ECO:0000313|EMBL:ELX11131.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source
beta-lactamase
13_2_20cm_scaffold_2004_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7633..8703
DNA (1071bp) protein (357aa)
Beta-lactamase-like (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00038292F9 rbh
ethe1; ETHE1, mitochondrial domain protein
13_2_20cm_scaffold_2004_8
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8694..9317)
DNA (624bp) protein (208aa)
Cell wall hydrolase SleB n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DX84_9GAMM
cell wall hydrolase SleB Tax=RBG_16_Gammaproteobacteria_62_13__curated
putative cell wall hydrolase
13_2_20cm_scaffold_2004_9
CG_Micra_06, Micraarchaeota, Archaea

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comp(9553..9903)
DNA (351bp) protein (117aa)
export-related chaperone CsaA; K06878 tRNA-binding protein Tax=CG_Micra_06
protein CsaA; K06878 tRNA-binding protein id=7717444 bin=BACIGN_2 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
protein CsaA
13_2_20cm_scaffold_2004_10
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

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comp(10011..12965)
DNA (2955bp) protein (985aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037391DF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC83234.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
13_2_20cm_scaffold_2004_11
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13182..14612
DNA (1431bp) protein (477aa)
Outer membrane efflux protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IPM9_HERSS rbh
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADJ64926.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspiri
13_2_20cm_scaffold_2004_12
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14629..15666
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B5F9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57437.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
13_2_20cm_scaffold_2004_13
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15679..17178
DNA (1500bp) protein (500aa)
Heavy metal efflux pump, cobalt-zinc-cadmium n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B374_9RHIZ
heavy metal efflux pump, cobalt-zinc-cadmium
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:AGK57438.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" sourc
Displaying 13 items

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