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13_2_20cm_scaffold_507

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_507_1
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..157
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000376AB59
nosC; cytochrome c5 Tax=RBG_16_Gamma2_60_9_curated
cytochrome c-type protein
13_2_20cm_scaffold_507_2

Not on your lists

comp(244..936)
DNA (693bp) protein (231aa)
Dithiobiotin synthetase n=1 Tax=mine drainage metagenome RepID=T1AZR7_9ZZZZ
Dithiobiotin synthetase {ECO:0000313|EMBL:EQD63057.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
dithiobiotin synthetase
13_2_20cm_scaffold_507_3
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(936..1823)
DNA (888bp) protein (296aa)
Malonyl-[acyl-carrier protein] O-methyltransferase n=2 Tax=sulfur-oxidizing symbionts RepID=G2D997_9GAMM
biotin biosynthesis protein BioC Tax=RBG_16_Gamma2_64_11_curated
malonyl-CoA O-methyltransferase
13_2_20cm_scaffold_507_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1816..2520)
DNA (705bp) protein (235aa)
Pimelyl-[acyl-carrier protein] methyl ester esterase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ANL2_9PROT
bioH protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
bioH protein
13_2_20cm_scaffold_507_5
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2517..3716)
DNA (1200bp) protein (400aa)
8-amino-7-oxononanoate synthase {ECO:0000256|HAMAP-Rule:MF_01693, ECO:0000256|SAAS:SAAS00016811}; Short=AONS {ECO:0000256|HAMAP-Rule:MF_01693};; EC=2.3.1.47 {ECO:0000256|HAMAP-Rule:MF_01693, ECO:00002
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000377FF80 rbh
13_2_20cm_scaffold_507_6
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3691..4710)
DNA (1020bp) protein (340aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1217721 species="Bacteria; Proteob
biotin synthase n=1 Tax=Dyella japonica RepID=UPI00036E9D39
biotin synthase
13_2_20cm_scaffold_507_7
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4772..5137)
DNA (366bp) protein (122aa)
Diacylglycerol kinase n=1 Tax=Thauera sp. 63 RepID=N6Y8S7_9RHOO
diacylglycerol kinase
Diacylglycerol kinase {ECO:0000313|EMBL:ENO78837.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
13_2_20cm_scaffold_507_8

Not on your lists

comp(5156..6085)
DNA (930bp) protein (310aa)
4-hydroxybenzoate octaprenyltransferase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BZZ3_9ZZZZ
4-hydroxybenzoate octaprenyltransferase {ECO:0000313|EMBL:EQD59485.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage meta
4-hydroxybenzoate octaprenyltransferase
13_2_20cm_scaffold_507_9
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6117..7382)
DNA (1266bp) protein (422aa)
MFS transporter n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003815642 rbh
MFS transporter {ECO:0000313|EMBL:EYR68709.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
major facilitator transporter
13_2_20cm_scaffold_507_10
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7388..9424)
DNA (2037bp) protein (679aa)
ATP-dependent DNA helicase RecG n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036774C1 rbh
ATP-dependent DNA helicase RecG
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_2_20cm_scaffold_507_11

Not on your lists

comp(9502..9891)
DNA (390bp) protein (130aa)
YjgF-like protein n=1 Tax=mine drainage metagenome RepID=T1ANK8_9ZZZZ
YjgF-like protein {ECO:0000313|EMBL:EQD58073.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
endoribonuclease L-PSP
13_2_20cm_scaffold_507_12
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9932..12148)
DNA (2217bp) protein (739aa)
GTP diphosphokinase (EC:2.7.6.5)
GTP diphosphokinase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQN0_THISH
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_2_20cm_scaffold_507_13

Not on your lists

comp(12165..12443)
DNA (279bp) protein (93aa)
RNA polymerase, omega subunit n=1 Tax=mine drainage metagenome RepID=T1AI95_9ZZZZ
RNA polymerase, omega subunit {ECO:0000313|EMBL:EQD60221.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA-directed RNA polymerase subunit omega
13_2_20cm_scaffold_507_14

Not on your lists

comp(12564..13199)
DNA (636bp) protein (212aa)
Guanylate kinase {ECO:0000313|EMBL:EQD53077.1}; EC=2.7.4.8 {ECO:0000313|EMBL:EQD53077.1};; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source
guanylate kinase (EC:2.7.4.8)
Guanylate kinase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1A7Y0_9ZZZZ
13_2_20cm_scaffold_507_15
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13227..13838)
DNA (612bp) protein (204aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GW39_9GAMM
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
13_2_20cm_scaffold_507_16
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13835..14557)
DNA (723bp) protein (241aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
Ribonuclease PH n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SXD2_META2 rbh
rph; ribonuclease PH
13_2_20cm_scaffold_507_17

Not on your lists

comp(14568..15323)
DNA (756bp) protein (252aa)
Protein serine/threonine phosphatase (Fragment) n=1 Tax=uncultured microorganism RepID=F8UHG9_9ZZZZ
Protein serine/threonine phosphatase {ECO:0000313|EMBL:AEI30476.1}; Flags: Fragment;; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
serine/threonine protein phosphatase
13_2_20cm_scaffold_507_18

Not on your lists

15445..16434
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1B888_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD64668.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_scaffold_507_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16431..16988
DNA (558bp) protein (186aa)
Phage integrase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCZ8_NITMU
Phage integrase
Phage integrase {ECO:0000313|EMBL:ABB73373.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis
13_2_20cm_scaffold_507_20

Not on your lists

comp(16985..17638)
DNA (654bp) protein (218aa)
RloB (Fragment) n=1 Tax=mine drainage metagenome RepID=T0Y0W3_9ZZZZ
RloB {ECO:0000313|EMBL:EQD26623.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_scaffold_507_21

Not on your lists

comp(17643..18905)
DNA (1263bp) protein (421aa)
Abortive infection protein n=1 Tax=mine drainage metagenome RepID=T0Y406_9ZZZZ rbh
Abortive infection protein {ECO:0000313|EMBL:EQD26622.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_scaffold_507_22
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19783..20352)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I6Q2_RHOVT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP70699.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium van
13_2_20cm_scaffold_507_23
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(20349..20786)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X2E3_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW68075.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC
13_2_20cm_scaffold_507_24
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

comp(21026..21505)
DNA (480bp) protein (160aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQU0_SIDLE
excinuclease ABC subunit C Tax=RBG_16_Armatimonadetes_58_9_curated
excinuclease ABC subunit C
13_2_20cm_scaffold_507_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(21514..24660)
DNA (3147bp) protein (1049aa)
type I restriction endonuclease, HsdR family; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=GWC2_Rokubacteria_70_16_curated
Type I restriction endonuclease, HsdR family id=4359100 bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
type I restriction endonuclease, HsdR family
13_2_20cm_scaffold_507_26

Not on your lists

comp(24657..24815)
DNA (159bp) protein (53aa)
Restriction endonuclease n=1 Tax=mine drainage metagenome RepID=T0ZWX5_9ZZZZ
Restriction endonuclease {ECO:0000313|EMBL:EQD49063.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_2_20cm_scaffold_507_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24812..25975)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHS0_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73386.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
13_2_20cm_scaffold_507_28
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25975..27264)
DNA (1290bp) protein (430aa)
type I restriction-modification system subunit S (EC:3.1.21.3)
Restriction endonuclease S subunit n=1 Tax=Methylomicrobium album BG8 RepID=H8GPC3_METAL rbh
Restriction endonuclease S subunit {ECO:0000313|EMBL:EIC30869.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Me
13_2_20cm_scaffold_507_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(27254..28807)
DNA (1554bp) protein (518aa)
hsdM; type I restriction-modification system DNA methylase (EC:2.1.1.72); K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=GWC2_Rokubacteria_70_16_curated
hsdM; type I restriction-modification system DNA methylase (EC:2.1.1.72)
Type I restriction-modification system DNA methylase id=4359040 bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
13_2_20cm_scaffold_507_30
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28836..29936)
DNA (1101bp) protein (367aa)
ATPase-like protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N941_9BURK
predicted ATPase AAA+ superfamily
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
Displaying 30 items

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