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13_2_20cm_scaffold_666

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_666_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WW23_9NOCA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_2_20cm_scaffold_666_2
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250..591)
DNA (342bp) protein (114aa)
Transcriptional regulator, ArsR family n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SVP8_POLSQ
hypothetical protein
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABP33562.1}; TaxID=312153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source=
13_2_20cm_scaffold_666_3

Not on your lists

comp(614..958)
DNA (345bp) protein (115aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YJK5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD35606.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_scaffold_666_4

Not on your lists

comp(1333..1713)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1B432_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD67651.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
13_2_20cm_scaffold_666_5
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1735..2934)
DNA (1200bp) protein (400aa)
Aminotransferase class I and II n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C014_NITHN rbh
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ADE16261.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus
13_2_20cm_scaffold_666_6
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3026..5047
DNA (2022bp) protein (674aa)
excinuclease ABC subunit B n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000367FB5A rbh
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
13_2_20cm_scaffold_666_7
CG_Gallio_03, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5283..7211
DNA (1929bp) protein (643aa)
threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CG_Gallio_03
thrS; threonine--tRNA ligase (EC:6.1.1.3)
threonyl-tRNA synthetase n=1 Tax=Thiothrix flexilis RepID=UPI00037107C6 rbh
13_2_20cm_scaffold_666_8

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7236..7736
DNA (501bp) protein (167aa)
Translation initiation factor IF-3 n=1 Tax=mine drainage metagenome RepID=T0ZNS3_9ZZZZ
Translation initiation factor IF-3 {ECO:0000313|EMBL:EQD46107.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
translation initiation factor IF-3
13_2_20cm_scaffold_666_9

Not on your lists


7836..8039
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=1 Tax=uncultured bacterium RepID=K2AY26_9BACT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
large subunit ribosomal protein L35
13_2_20cm_scaffold_666_10

Not on your lists


8067..8429
DNA (363bp) protein (121aa)
Ribosomal protein L20, bacterial-type n=1 Tax=mine drainage metagenome RepID=T0YU38_9ZZZZ
Ribosomal protein L20, bacterial-type {ECO:0000313|EMBL:EQD35407.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LSU ribosomal protein L20P
13_2_20cm_scaffold_666_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8445..9473
DNA (1029bp) protein (343aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7EUR8_PSEST rbh
phenylalanyl-tRNA synthetase, alpha-subunit
13_2_20cm_scaffold_666_12
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9470..11857
DNA (2388bp) protein (796aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00037DC74F rbh
13_2_20cm_scaffold_666_13
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11862..12161
DNA (300bp) protein (100aa)
transcriptional regulator n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036EBEBD
integration host factor subunit alpha
integration host factor subunit alpha Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
13_2_20cm_scaffold_666_14
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12142..12498
DNA (357bp) protein (119aa)
MerR family transcriptional regulator n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1S6_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHK78940.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodo
13_2_20cm_scaffold_666_15
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12701..12994)
DNA (294bp) protein (98aa)
Transposase (Fragment) n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0GY70_RHILT
Transposase {ECO:0000313|EMBL:EJB02620.1}; Flags: Fragment;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;"
Putative transposase
13_2_20cm_scaffold_666_16

Not on your lists

13136..13462
DNA (327bp) protein (109aa)
PadR family transcripitonal regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D7DC8C
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:EQD44639.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PadR family transcriptional regulator
13_2_20cm_scaffold_666_17
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13464..14174
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYV8_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ23560.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
13_2_20cm_scaffold_666_18
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14332..14829
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DJK3_9BACT
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
13_2_20cm_scaffold_666_19
Pseudomonas sp. GM21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14990..15217
DNA (228bp) protein (76aa)
Repressor n=1 Tax=Pseudomonas aeruginosa VRFPA06 RepID=V8HZS1_PSEAI
DNA-binding protein
Putative transcriptional regulator {ECO:0000313|EMBL:EJM10241.1}; TaxID=1144325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
13_2_20cm_scaffold_666_20
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15485..15598
DNA (114bp) protein (38aa)
Uncharacterized protein Tax=GWD2_Deltaproteobacteria_55_8_curated
13_2_20cm_scaffold_666_21
unknown

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15781..15969
DNA (189bp) protein (63aa)

This feature has no annotations

13_2_20cm_scaffold_666_22
unknown

Not on your lists

comp(16611..16754)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 22 items

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