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13_2_20cm_scaffold_1195

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1195_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..1331)
DNA (1329bp) protein (443aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRB0_KORVE
two component, sigma54 specific, Fis family transcriptional regulator Tax=RBG_16_Acidobacteria_70_10_curated
Fis family transcriptional regulator
13_2_20cm_scaffold_1195_2
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1503..2108)
DNA (606bp) protein (202aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
13_2_20cm_scaffold_1195_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2152..3471)
DNA (1320bp) protein (440aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRA8_KORVE
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PAS/PAC sensor signal transduction histidine kinase
13_2_20cm_scaffold_1195_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(3892..4566)
DNA (675bp) protein (225aa)
type 4 prepilin peptidase 1 (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI0003653069
peptidase A24
13_2_20cm_scaffold_1195_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

4738..5790
DNA (1053bp) protein (351aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein id=12557553 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_2_20cm_scaffold_1195_6
unknown

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6200..7174
DNA (975bp) protein (325aa)

This feature has no annotations

13_2_20cm_scaffold_1195_7
unknown

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comp(7324..8076)
DNA (753bp) protein (251aa)

This feature has no annotations

13_2_20cm_scaffold_1195_8
unknown

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8230..8784
DNA (555bp) protein (185aa)

This feature has no annotations

13_2_20cm_scaffold_1195_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8891..9142
DNA (252bp) protein (84aa)
transcription factor n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003AAFF76
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Antitoxin
13_2_20cm_scaffold_1195_10
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9139..9531
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Sphingobium baderi LL03 RepID=T0HXD5_9SPHN
hypothetical protein
13_2_20cm_scaffold_1195_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10038..11561)
DNA (1524bp) protein (508aa)
Histidine ammonia-lyase {ECO:0000255|HAMAP-Rule:MF_00229}; Short=Histidase {ECO:0000255|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000255|HAMAP-Rule:MF_00229};; TaxID=204669 species="Bacteria; Acidobacte
Histidine ammonia-lyase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=HUTH_KORVE
histidine ammonia-lyase
13_2_20cm_scaffold_1195_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11558..11995)
DNA (438bp) protein (146aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family {ECO:0000313|EMBL:CDM64302.1}; EC=3.1.2.- {ECO:0000313|EMBL:CDM64302.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyr
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036AABFA
thioesterase superfamily protein
13_2_20cm_scaffold_1195_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12006..12794)
DNA (789bp) protein (263aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRS2_KORVE
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABF40428.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis
13_2_20cm_scaffold_1195_14
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12809..13744)
DNA (936bp) protein (312aa)
HMGL domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F7A6_ACIC5
HMGL domain-containing protein
HMGL domain protein {ECO:0000313|EMBL:ACO32706.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC
13_2_20cm_scaffold_1195_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13967..15634)
DNA (1668bp) protein (556aa)
Propionyl-CoA carboxylase {ECO:0000313|EMBL:ABF40430.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ABF40430.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Korib
Propionyl-CoA carboxylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRS0_KORVE
propionyl-CoA carboxylase
Displaying 15 items

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