ggKbase home page

13_2_20cm_scaffold_168

Search features with annotation key words

Displaying items 1-30 of 36 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_168_1
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

128..544
DNA (417bp) protein (139aa)
Metallophosphoesterase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I115_RHOVT
Phosphoesterase {ECO:0000313|EMBL:KFF11820.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
metallophosphoesterase
13_2_20cm_scaffold_168_2
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

918..1223
DNA (306bp) protein (102aa)
Putative transcriptional regulator with C-terminal CBS domains n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YC02_9BRAD
Putative transcriptional regulator with C-terminal CBS domains {ECO:0000313|EMBL:EHR01125.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Brady
transcriptional regulator
13_2_20cm_scaffold_168_3

Not on your lists

1220..2503
DNA (1284bp) protein (428aa)
HipA protein n=1 Tax=mine drainage metagenome RepID=E6PY78_9ZZZZ
HipA protein {ECO:0000313|EMBL:CBH99887.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
HipA protein
13_2_20cm_scaffold_168_4
unknown

Not on your lists

2500..2856
DNA (357bp) protein (119aa)

This feature has no annotations

13_2_20cm_scaffold_168_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

3638..4603
DNA (966bp) protein (322aa)
Cation diffusion facilitator family transporter n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NK8_SOLUE
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ABJ88762.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" so
13_2_20cm_scaffold_168_6
unknown

Not on your lists

comp(4606..5394)
DNA (789bp) protein (263aa)

This feature has no annotations

13_2_20cm_scaffold_168_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

5987..6346
DNA (360bp) protein (120aa)
anti-sigma factor antagonist n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B4FA0F
anti-anti-sigma factor; K04749 anti-sigma B factor antagonist Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
anti-anti-sigma factor family protein
13_2_20cm_scaffold_168_8
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6515..7240
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000382AB36
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU35964.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
13_2_20cm_scaffold_168_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8248..8727
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B65327
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88322.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_scaffold_168_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(8987..9217)
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Putative uncharacterized protein id=2870258 bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
13_2_20cm_scaffold_168_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(9536..10897)
DNA (1362bp) protein (454aa)
Uncharacterized conserved protein UCP033563 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P029_GRAMM
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_168_12
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

10916..11722
DNA (807bp) protein (269aa)
HAD family hydrolase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
HAD family hydrolase (EC:3.1.3.18)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VV9_SOLUE
13_2_20cm_scaffold_168_13
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(11685..13097)
DNA (1413bp) protein (471aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPK3_9BURK
hypothetical membrane protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_2_20cm_scaffold_168_14

Not on your lists

comp(13109..13699)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 270 RepID=E3T6U1_9BACT
protein of unknown function DUF336
Putative uncharacterized protein {ECO:0000313|EMBL:ADC36035.1}; TaxID=698387 species="Bacteria; environmental samples.;" source="uncultured bacterium 270.;"
13_2_20cm_scaffold_168_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(13736..14938)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAU6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_2_20cm_scaffold_168_16
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15245..16483
DNA (1239bp) protein (413aa)
fatty acid desaturase n=1 Tax=Pseudomonas chlororaphis RepID=UPI0002FB6C3B
fatty acid desaturase
Uncharacterized protein {ECO:0000313|EMBL:AJO80462.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M
13_2_20cm_scaffold_168_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16754..17617
DNA (864bp) protein (288aa)
PEGA domain protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II69_KORVE
PEGA domain-containing protein
PEGA domain protein {ECO:0000313|EMBL:ABF43431.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_2_20cm_scaffold_168_18
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

17704..18855
DNA (1152bp) protein (384aa)
Glycosyl transferase group 1 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZW40_OPITP
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACB76054.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 /
13_2_20cm_scaffold_168_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

18843..20072
DNA (1230bp) protein (410aa)
Putative glycosyltransferase n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GGV9_METTF
LPS biosynthesis RfbU related protein Tax=RBG_13_Acidobacteria_68_16_curated
LPS biosynthesis RfbU related protein
13_2_20cm_scaffold_168_20
unknown

Not on your lists

20077..20937
DNA (861bp) protein (287aa)

This feature has no annotations

13_2_20cm_scaffold_168_21
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

21005..22897
DNA (1893bp) protein (631aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI000374528D
asparagine synthase
13_2_20cm_scaffold_168_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22931..24673
DNA (1743bp) protein (581aa)
carbamoyltransferase; K00612 carbamoyltransferase [EC:2.1.3.-] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Nodulation protein nolNO id=3080371 bin=GWC2_Nitrospirae-rel_56_14 species=Cyanobium gracile genus=Cyanobium taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
carbamoyltransferase
13_2_20cm_scaffold_168_23
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

24909..26123
DNA (1215bp) protein (405aa)
Glycosyl transferase group 1 id=3916276 bin=GWF2_Lentisphaerae_52_8 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
group 1 glycosyl transferase Tax=GWF2_Lentisphaerae_52_8_curated
glycosyltransferase
13_2_20cm_scaffold_168_24
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

26139..27173
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD196 RepID=R8GN33_BACCE
galE; UDP-glucose 4-epimerase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
galE; UDP-glucose 4-epimerase
13_2_20cm_scaffold_168_25
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

27363..28415
DNA (1053bp) protein (351aa)
Glycosyl transferase, family 4 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1V2_ROSS1
glycosyl transferase family protein
Glycosyl transferase, family 4 {ECO:0000313|EMBL:ABQ92855.1}; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.
13_2_20cm_scaffold_168_26
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28586..29806
DNA (1221bp) protein (407aa)
bchP-like; geranylgeranyl hydrogenase related Tax=RBG_16_Deltaproteobacteria_48_10_curated
Geranylgeranyl reductase id=5800202 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
13_2_20cm_scaffold_168_27
R_NC10_66_22, NC10, Bacteria

Not on your lists

29874..31223
DNA (1350bp) protein (450aa)
ugd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
nsd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] id=14428695 bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
13_2_20cm_scaffold_168_28
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(31309..32247)
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2V1_CALAS
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:BAL99588.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldili
13_2_20cm_scaffold_168_29
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(32399..33553)
DNA (1155bp) protein (385aa)
Glycoside hydrolase family 5 n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X6U9_ACISM
glycoside hydrolase family protein
Glycoside hydrolase family 5 {ECO:0000313|EMBL:ADW71249.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain
13_2_20cm_scaffold_168_30
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(33637..34104)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NRH8_GRAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU37336.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
Displaying items 1-30 of 36 in total

View Taxonomy