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13_2_20cm_scaffold_1807

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1807_1
unknown

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2..103
DNA (102bp) protein (34aa)

This feature has no annotations

13_2_20cm_scaffold_1807_2
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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265..1140
DNA (876bp) protein (292aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Ac
Phosphatidate cytidylyltransferase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZDD2_TERRK
putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase
13_2_20cm_scaffold_1807_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

1184..2329
DNA (1146bp) protein (382aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) n=1 Tax=mine drainage metagenome RepID=E6QJX3_9ZZZZ
1-deoxy-D-xylulose 5-phosphate reductoisomerase
13_2_20cm_scaffold_1807_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

2357..3694
DNA (1338bp) protein (446aa)
peptidase M50, membrane-associated zinc metallopeptidase; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Putative membrane-associated zinc metalloprotease n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QM4_SOLUE
zinc metalloprotease
13_2_20cm_scaffold_1807_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

3724..4224
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036FE2A8
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ferric uptake regulator family protein
13_2_20cm_scaffold_1807_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4983..5726
DNA (744bp) protein (248aa)
HNH endonuclease n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE61_ALIDK
HNH endonuclease Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
HNH endonuclease
13_2_20cm_scaffold_1807_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5794..6216)
DNA (423bp) protein (141aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20YW0_RHOPB
PilT protein-like protein
13_2_20cm_scaffold_1807_8
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6213..6461)
DNA (249bp) protein (83aa)
Plasmid stability protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1GB32_9BURK
hypothetical protein
Plasmid stability protein {ECO:0000313|EMBL:EDT06672.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gra
13_2_20cm_scaffold_1807_9
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6530..6793
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QWR5_METTR
Uncharacterized protein {ECO:0000313|EMBL:ESQ87424.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
hypothetical protein
13_2_20cm_scaffold_1807_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7131..7556
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037B67EB
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_2_20cm_scaffold_1807_11
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7821..9002
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Leptospirillum sp. Group II 'C75' RepID=U4QPG2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KHM96466.1}; TaxID=56460 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicat
hypothetical protein
13_2_20cm_scaffold_1807_12
CG_Nitrosp_02, Nitrospirae, Bacteria

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9271..10182
DNA (912bp) protein (304aa)
hypothetical protein Tax=CG_Nitrosp_02
hypothetical protein id=4809993 bin=GWA2_OP3_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
13_2_20cm_scaffold_1807_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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10397..10729
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ05_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41045.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_2_20cm_scaffold_1807_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(10906..11199)
DNA (294bp) protein (98aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Rhizobium sp. CF142 RepID=J1T6J0_9RHIZ
addiction module antitoxin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
plasmid stabilization system protein
13_2_20cm_scaffold_1807_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(11208..11531)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Uncharacterized protein id=1843360 bin=GWA2_Elusimicrobia_66_18 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
13_2_20cm_scaffold_1807_16

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comp(11715..12338)
DNA (624bp) protein (208aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL47440.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_2_20cm_scaffold_1807_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(12443..14299)
DNA (1857bp) protein (619aa)
Beta-lactamase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027I3_SOLUE
beta-lactamase-like; K06167 PhnP protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
beta-lactamase domain-containing protein
13_2_20cm_scaffold_1807_18
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(14357..14836)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDZ9_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11061.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
13_2_20cm_scaffold_1807_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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14998..15933
DNA (936bp) protein (312aa)
MazG family protein {ECO:0000313|EMBL:CDM64519.1}; EC=3.6.1.8 {ECO:0000313|EMBL:CDM64519.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinom
hypothetical protein n=1 Tax=Laceyella sacchari RepID=UPI0003B72A88
MazG family protein
13_2_20cm_scaffold_1807_20
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

15930..16670
DNA (741bp) protein (247aa)
GCN5-related N-acetyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPL3_KORVE
N-acetyltransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
N-acetyltransferase
13_2_20cm_scaffold_1807_21
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

16753..17859
DNA (1107bp) protein (369aa)
mandelate racemase/muconate lactonizing enzyme; K02549 O-succinylbenzoate synthase [EC:4.2.1.113] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
o-succinylbenzoic acid synthetase (EC:4.2.1.113)
O-succinylbenzoic acid synthetase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZF90_TERRK
13_2_20cm_scaffold_1807_22
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

17863..18840
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020J4_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_2_20cm_scaffold_1807_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

19008..20930
DNA (1923bp) protein (641aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037F2EBC
serine/threonin protein kinase
Serine/threonine protein kinase with TPR repeats {ECO:0000313|EMBL:ABJ84784.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
13_2_20cm_scaffold_1807_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

21068..22171
DNA (1104bp) protein (368aa)
isocitrate dehydrogenase (EC:1.1.1.41) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
3-isopropylmalate dehydrogenase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UZ05_PYRAB
leuB-1; 3-isopropylmalate dehydrogenase
13_2_20cm_scaffold_1807_25
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(22282..22950)
DNA (669bp) protein (223aa)
Rhomboid family protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBK6_THET1
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
rhomboid domain containing peptidase
13_2_20cm_scaffold_1807_26
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

23301..24041
DNA (741bp) protein (247aa)
DNA repair protein RecO n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1J2_ACIC5
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
recO; DNA repair protein RecO
13_2_20cm_scaffold_1807_27
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

24038..24982
DNA (945bp) protein (315aa)
glyQ; glycyl-tRNA synthetase subunit alpha; K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Glycyl-tRNA synthetase, alpha chain n=1 Tax=mine drainage metagenome RepID=E6QJY3_9ZZZZ
glyQ; glycyl-tRNA synthetase subunit alpha
13_2_20cm_scaffold_1807_28
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

24979..26061
DNA (1083bp) protein (361aa)
glycine--tRNA ligase (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Glycyl-tRNA synthetase beta chain n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISF2_KORVE
glycine--tRNA ligase subunit beta
Displaying 28 items

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