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13_2_20cm_scaffold_1904

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1904_1
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2..2188
DNA (2187bp) protein (729aa)
Na-Ca exchanger/integrin-beta4 n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q114P2_TRIEI
Na-Ca exchanger/integrin-beta4
Na-Ca exchanger/integrin-beta4 {ECO:0000313|EMBL:ABG51032.1}; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;" source="Trichodesmium erythraeum (
13_2_20cm_scaffold_1904_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2274..3248)
DNA (975bp) protein (325aa)
tRNA pseudouridine synthase B (EC:4.2.1.70); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=TRUB_SOLUE
13_2_20cm_scaffold_1904_3
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3299..3667)
DNA (369bp) protein (123aa)
Ribosome-binding factor A n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=RBFA_THERP
ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
rbfA; ribosome-binding factor A
13_2_20cm_scaffold_1904_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3688..3969)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000366BAE8
hypothetical protein; K09764 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_1904_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3998..5995)
DNA (1998bp) protein (666aa)
Translation initiation factor IF-2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=IF2_KORVE
translation initiation factor 2; K02519 translation initiation factor IF-2 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
translation initiation factor 2
13_2_20cm_scaffold_1904_6
unknown

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6262..6549
DNA (288bp) protein (96aa)

This feature has no annotations

13_2_20cm_scaffold_1904_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(6932..8431)
DNA (1500bp) protein (500aa)
NusA antitermination factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIT2_KORVE
NusA antitermination factor; K02600 N utilization substance protein A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
NusA antitermination factor
13_2_20cm_scaffold_1904_8
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8602..9213)
DNA (612bp) protein (204aa)
Ribosome maturation factor RimP n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=RIMP_ACIC5
hypothetical protein
Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulat
13_2_20cm_scaffold_1904_9
Entamoeba histolytica, Entamoeba, Eukaryota

Not on your lists

comp(9622..10830)
DNA (1209bp) protein (403aa)
Trichohyalin, putative n=1 Tax=Entamoeba histolytica KU27 RepID=M2SBJ1_ENTHI
Trichohyalin, putative {ECO:0000313|EMBL:EMD48711.1}; TaxID=885311 species="Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba.;" source="Entamoeba histolytica KU27.;"
13_2_20cm_scaffold_1904_10
Poribacteria bacterium WGA-3G, Poribacteria, Bacteria

Not on your lists

comp(10921..11316)
DNA (396bp) protein (132aa)
glyoxalase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B315BC
13_2_20cm_scaffold_1904_11
unknown

Not on your lists

comp(11310..11822)
DNA (513bp) protein (171aa)

This feature has no annotations

13_2_20cm_scaffold_1904_12
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12060..13214)
DNA (1155bp) protein (385aa)
Putative Transcriptional regulator n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2JAX2_9BURK rbh
Putative Transcriptional regulator {ECO:0000313|EMBL:CCD29924.1}; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter.;" so
hypothetical protein
13_2_20cm_scaffold_1904_13
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13162..13827)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035C6165
Uncharacterized protein {ECO:0000313|EMBL:EKQ58410.1}; TaxID=1127439 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axono
Hypothetical protein
13_2_20cm_scaffold_1904_14
unknown

Not on your lists

comp(14128..14574)
DNA (447bp) protein (149aa)

This feature has no annotations

13_2_20cm_scaffold_1904_15
unknown

Not on your lists

comp(14519..15112)
DNA (594bp) protein (198aa)

This feature has no annotations

13_2_20cm_scaffold_1904_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15325..16200)
DNA (876bp) protein (292aa)
putative hybrid sensor histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Diguanylate cyclase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRY3_KORVE
diguanylate cyclase
13_2_20cm_scaffold_1904_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(16462..16815)
DNA (354bp) protein (118aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SH7_SOLUE
outer membrane chaperone Skp Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
outer membrane chaperone Skp
Displaying 17 items

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