ggKbase home page

13_2_20cm_scaffold_2301

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_2301_1
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

1..2622
DNA (2622bp) protein (874aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
dnaE3; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F714_ACIC5
13_2_20cm_scaffold_2301_2
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

2619..3638
DNA (1020bp) protein (340aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_c
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=2 Tax=Geobacter sulfurreducens RepID=ACCA_GEOSL
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha
13_2_20cm_scaffold_2301_3
unknown

Not on your lists

comp(3651..4172)
DNA (522bp) protein (174aa)

This feature has no annotations

13_2_20cm_scaffold_2301_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4288..4629)
DNA (342bp) protein (114aa)
id=4341239 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
id=3297716 Tax=GWA2_Rokubacteria_70_23_curated
13_2_20cm_scaffold_2301_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4654..5808)
DNA (1155bp) protein (385aa)
id=3297714 Tax=GWA2_Rokubacteria_70_23_curated
id=3297714 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_2_20cm_scaffold_2301_6
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5934..7211)
DNA (1278bp) protein (426aa)
von Willebrand factor, type A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILJ2_KORVE
von Willebrand factor, type A; K07114 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
von Willebrand factor A
13_2_20cm_scaffold_2301_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(7239..8735)
DNA (1497bp) protein (499aa)
magnesium protoporphyrin chelatase; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Magnesium protoporphyrin chelatase, putative n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025X1_SOLUE
magnesium protoporphyrin chelatase
13_2_20cm_scaffold_2301_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8796..9338)
DNA (543bp) protein (181aa)
Peptidase S16 lon domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJL9_RHOM4
peptidase S16 lon domain-containing protein
Peptidase S16 lon domain protein {ECO:0000313|EMBL:ACY48677.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothe
13_2_20cm_scaffold_2301_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(9483..12041)
DNA (2559bp) protein (853aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ND2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88838.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_2_20cm_scaffold_2301_10
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

12863..13600
DNA (738bp) protein (246aa)
export ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RBG_16_Zixibacteria_43_9_curated
ABC transporter, membrane protein id=1913591 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
multidrug ABC transporter substrate-binding protein
13_2_20cm_scaffold_2301_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13632..14969
DNA (1338bp) protein (446aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Geobacter sp. (strain M18) RepID=E8WJJ6_GEOS8
periplasmic component of efflux system; K02005 HlyD family secretion protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
RND family efflux transporter MFP subunit
13_2_20cm_scaffold_2301_12
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

14982..15797
DNA (816bp) protein (272aa)
ABC transporter related n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXC6_OPITP
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
ABC transporter-like protein
13_2_20cm_scaffold_2301_13
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16180..16854
DNA (675bp) protein (225aa)
Amidohydrolase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LWL4_HALO1
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ACY17664.1}; Flags: Precursor;; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="
Displaying 13 items

View Taxonomy