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13_2_20cm_scaffold_262

Search features with annotation key words

Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_262_1
unknown

Not on your lists

comp(3..761)
DNA (759bp) protein (253aa)

This feature has no annotations

13_2_20cm_scaffold_262_2
unknown

Not on your lists

comp(886..1479)
DNA (594bp) protein (198aa)

This feature has no annotations

13_2_20cm_scaffold_262_3
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1681..3903)
DNA (2223bp) protein (741aa)
(p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
(P)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVC0_KORVE
(p)ppGpp synthetase SpoT/RelA
13_2_20cm_scaffold_262_4
unknown

Not on your lists

comp(4569..4967)
DNA (399bp) protein (133aa)

This feature has no annotations

13_2_20cm_scaffold_262_5
unknown

Not on your lists

5415..5564
DNA (150bp) protein (50aa)

This feature has no annotations

13_2_20cm_scaffold_262_6
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6137..7336)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036FBA26 rbh
Transposase {ECO:0000313|EMBL:CCV03127.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans S
transposase family protein
13_2_20cm_scaffold_262_7
unknown

Not on your lists

comp(7434..8438)
DNA (1005bp) protein (335aa)

This feature has no annotations

13_2_20cm_scaffold_262_8
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(8972..9823)
DNA (852bp) protein (284aa)
TPR repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE3_KORVE
TPR repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_2_20cm_scaffold_262_9
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(9918..10331)
DNA (414bp) protein (138aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X5J5_ACISM
biopolymer transport protein ExbD/TolR Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
biopolymer transporter ExbD/TolR
13_2_20cm_scaffold_262_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(10422..10850)
DNA (429bp) protein (143aa)
Outer membrane transport energization protein ExbD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE4_KORVE
biopolymer transport protein ExbD/TolR Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
biopolymer transport protein ExbD/TolR
13_2_20cm_scaffold_262_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(10971..11420)
DNA (450bp) protein (150aa)
Outer membrane transport energization protein ExbD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE5_KORVE
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
biopolymer transport protein ExbD/TolR
13_2_20cm_scaffold_262_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(11427..11999)
DNA (573bp) protein (191aa)
Outer membrane transport energization protein ExbB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE6_KORVE
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
MotA/TolQ/ExbB proton channel
13_2_20cm_scaffold_262_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(11992..12933)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035DC35C
TonB-like protein; K03832 periplasmic protein TonB Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
TonB family protein
13_2_20cm_scaffold_262_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(12939..14228)
DNA (1290bp) protein (430aa)
Protein translocase subunit SecF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=SECF_KORVE
protein translocase subunit secF; K03074 preprotein translocase subunit SecF Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
protein translocase subunit secF
13_2_20cm_scaffold_262_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(14379..16013)
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000367D7BF
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
protein-export membrane protein SecD
13_2_20cm_scaffold_262_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(16053..16367)
DNA (315bp) protein (105aa)
Protein translocase subunit yajC n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVF0_KORVE
protein translocase subunit yajC
Protein translocase subunit yajC {ECO:0000313|EMBL:ABF39150.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
13_2_20cm_scaffold_262_17

Not on your lists

comp(16559..17695)
DNA (1137bp) protein (379aa)
tRNA-guanine transglycosylase {ECO:0000313|EMBL:CBI08564.1}; EC=2.4.2.29 {ECO:0000313|EMBL:CBI08564.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mi
tRNA-guanine transglycosylase n=1 Tax=mine drainage metagenome RepID=E6QMU3_9ZZZZ
queuine tRNA-ribosyltransferase
13_2_20cm_scaffold_262_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(17753..18562)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A11_SOLUE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_262_19
unknown

Not on your lists

18661..19533
DNA (873bp) protein (291aa)

This feature has no annotations

13_2_20cm_scaffold_262_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(19530..20138)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NF2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88818.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_2_20cm_scaffold_262_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20238..21548
DNA (1311bp) protein (437aa)
Major facilitator superfamily (MFS) transporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILH1_KORVE
major facilitator superfamily transporter
Major facilitator superfamily (MFS) transporter {ECO:0000313|EMBL:ABF42279.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kori
13_2_20cm_scaffold_262_22
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21582..23447)
DNA (1866bp) protein (622aa)
LigA n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGE1_ANADE
Putative MscS family protein {ECO:0000313|EMBL:GAO03560.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
LigA
13_2_20cm_scaffold_262_23
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23565..24083
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8N155_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ELS32769.1}; Flags: Precursor;; TaxID=927668 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena
hypothetical protein
13_2_20cm_scaffold_262_24
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

24300..24515
DNA (216bp) protein (72aa)
Uncharacterized protein family UPF0150 n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TUH1_9CYAN
hypothetical protein
Uncharacterized protein family UPF0150 {ECO:0000313|EMBL:AFY85801.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;
13_2_20cm_scaffold_262_25
unknown

Not on your lists

24530..24811
DNA (282bp) protein (94aa)

This feature has no annotations

13_2_20cm_scaffold_262_26
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(25141..26883)
DNA (1743bp) protein (581aa)
RNA polymerase sigma factor SigA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIK4_KORVE
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
sigma 38, RpoS
13_2_20cm_scaffold_262_27
unknown

Not on your lists

26928..27428
DNA (501bp) protein (167aa)

This feature has no annotations

13_2_20cm_scaffold_262_28
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(27706..29472)
DNA (1767bp) protein (589aa)
DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
dnaG; DNA primase (EC:2.7.7.-)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000371D1B6
13_2_20cm_scaffold_262_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(29491..30849)
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003803410 rbh
Pro-Hyp dipeptidase
Pro-Hyp dipeptidase {ECO:0000313|EMBL:ABF40827.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_2_20cm_scaffold_262_30
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(30971..31654)
DNA (684bp) protein (228aa)
Endonuclease MutS2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P03_SOLUE
Smr protein/MutS2; K07456 DNA mismatch repair protein MutS2 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Smr protein/MutS2
Displaying items 1-30 of 50 in total

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