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13_2_20cm_scaffold_395

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_395_1

Not on your lists

comp(3..1091)
DNA (1089bp) protein (363aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL09722.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_2_20cm_scaffold_395_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1106..1879)
DNA (774bp) protein (258aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_2_20cm_scaffold_395_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(1876..2397)
DNA (522bp) protein (174aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
13_2_20cm_scaffold_395_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2417..3025)
DNA (609bp) protein (203aa)
General secretion pathway protein H n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SIF8_GALCS
FimT; K08084 type IV fimbrial biogenesis protein FimT Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
general secretion pathway protein H
13_2_20cm_scaffold_395_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3588..4760
DNA (1173bp) protein (391aa)
gcdH; glutaryl-CoA dehydrogenase (EC:1.3.8.6)
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:ACO33458.1}; EC=1.3.8.6 {ECO:0000313|EMBL:ACO33458.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.
acyl-CoA dehydrogenase n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036D5F7A
13_2_20cm_scaffold_395_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

4883..6169
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000379CD24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87242.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_2_20cm_scaffold_395_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7639..7947)
DNA (309bp) protein (103aa)
YD repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIP9_KORVE
YD repeat-containing protein
YD repeat protein {ECO:0000313|EMBL:ABF43251.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter vers
13_2_20cm_scaffold_395_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7944..8738)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIQ0_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43250.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
13_2_20cm_scaffold_395_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9187..10734)
DNA (1548bp) protein (516aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0V9_9GAMM
Putative oxidoreductase {ECO:0000313|EMBL:EIL93100.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
oxidoreductase
13_2_20cm_scaffold_395_10
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(10757..11383)
DNA (627bp) protein (209aa)
Conserved hypothetical membrane protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AQY6_DESPS
Uncharacterized protein {ECO:0000313|EMBL:EYB68031.1}; TaxID=1476583 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
hypothetical protein
13_2_20cm_scaffold_395_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11494..13314)
DNA (1821bp) protein (607aa)
Amidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMP5_KORVE rbh
amidase
Amidase {ECO:0000313|EMBL:ABF41855.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (st
13_2_20cm_scaffold_395_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13415..14383)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZL7_SOLUE
Zinc carboxypeptidase {ECO:0000313|EMBL:CDM64032.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_2_20cm_scaffold_395_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14541..16379)
DNA (1839bp) protein (613aa)
Zinc carboxypeptidase {ECO:0000313|EMBL:CDM64032.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein id=17195904 bin=RBG_16_Aminicenantes_63_14 tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_2_20cm_scaffold_395_14
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

16526..17512
DNA (987bp) protein (329aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] id=14627513 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
13_2_20cm_scaffold_395_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(17535..19076)
DNA (1542bp) protein (514aa)
WD40 domain protein beta Propeller n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPA0_ROSS1
WD40 domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
WD40 domain-containing protein
13_2_20cm_scaffold_395_16
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(19422..20375)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJJ2_RUNSL
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein
13_2_20cm_scaffold_395_17
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20527..21897
DNA (1371bp) protein (457aa)
amino acid permease n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B4AAD2 rbh
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AIZ62572.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
13_2_20cm_scaffold_395_18
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

21972..24503
DNA (2532bp) protein (844aa)
LmbE family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
LmbE family protein id=16927978 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
13_2_20cm_scaffold_395_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

24634..25257
DNA (624bp) protein (208aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_2_20cm_scaffold_395_20
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(25290..25580)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRB6_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_2_20cm_scaffold_395_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26203..26565
DNA (363bp) protein (121aa)
PadR family transcripitonal regulator n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035D0D12
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABF43285.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ve
13_2_20cm_scaffold_395_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26575..29226
DNA (2652bp) protein (884aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIL6_KORVE
efflux ABC transporter inner membrane protein
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:ABF43284.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
13_2_20cm_scaffold_395_23
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

29364..30146
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIF8_KORVE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_2_20cm_scaffold_395_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

30395..33115
DNA (2721bp) protein (907aa)
ribonuclease R; K12573 ribonuclease R [EC:3.1.-.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
RNAse R (EC:3.1.-.-)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036D27E6
13_2_20cm_scaffold_395_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(33654..34178)
DNA (525bp) protein (175aa)
Dihydrofolate reductase (EC:1.5.1.3)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000382844B
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_2_20cm_scaffold_395_26
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

34727..35893
DNA (1167bp) protein (389aa)
phosphoserine aminotransferase apoenzyme (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine
Phosphoserine aminotransferase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B604_TURPD
13_2_20cm_scaffold_395_27
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36005..37345
DNA (1341bp) protein (447aa)
citrate synthase I (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
gltA; citrate synthase (EC:2.3.3.1) id=14430702 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
citrate synthase I (EC:2.3.3.1)
13_2_20cm_scaffold_395_28
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

37443..37838
DNA (396bp) protein (132aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_2_20cm_scaffold_395_29
unknown

Not on your lists

comp(37945..38280)
DNA (336bp) protein (112aa)

This feature has no annotations

13_2_20cm_scaffold_395_30
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(38411..39265)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037BCE14
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
Displaying items 1-30 of 57 in total

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