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13_2_20cm_scaffold_5106

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5106_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2..1906
DNA (1905bp) protein (635aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta-prime n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=UPI0000D76CD4
DNA-directed RNA polymerase subunit beta-prime
13_2_20cm_scaffold_5106_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2127..4784
DNA (2658bp) protein (886aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQS3_KORVE
signal transduction histidine kinase, nitrogen specific, NtrB
13_2_20cm_scaffold_5106_3
unknown

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5022..5417
DNA (396bp) protein (132aa)

This feature has no annotations

13_2_20cm_scaffold_5106_4
unknown

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5464..6048
DNA (585bp) protein (195aa)

This feature has no annotations

13_2_20cm_scaffold_5106_5
unknown

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comp(5989..6111)
DNA (123bp) protein (41aa)

This feature has no annotations

13_2_20cm_scaffold_5106_6
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(6188..7030)
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKE1_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_2_20cm_scaffold_5106_7
unknown

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comp(7378..7596)
DNA (219bp) protein (73aa)

This feature has no annotations

13_2_20cm_scaffold_5106_8
unknown

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comp(7796..8131)
DNA (336bp) protein (112aa)

This feature has no annotations

13_2_20cm_scaffold_5106_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(8396..9835)
DNA (1440bp) protein (480aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curat
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GATA_KORVE
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
13_2_20cm_scaffold_5106_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(9909..10214)
DNA (306bp) protein (102aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPHIGHO2_01_FULL_Acidobac
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUE6_KORVE
aspartyl/glutamyl-tRNA amidotransferase subunit C
13_2_20cm_scaffold_5106_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(10225..11511)
DNA (1287bp) protein (429aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
gcpE; 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=12554811 bin=CNBR_ACIDO species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
13_2_20cm_scaffold_5106_12
unknown

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11611..11781
DNA (171bp) protein (57aa)

This feature has no annotations

13_2_20cm_scaffold_5106_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(11701..12204)
DNA (504bp) protein (168aa)
transcriptional regulator, MarR family id=14426137 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
transcriptional regulator, MarR family Tax=CSP1_2_Dadabacteria
MarR family transcriptional regulator
13_2_20cm_scaffold_5106_14
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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12349..12921
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035CD5EB
transcriptional regulator domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
transcriptional regulatory protein-like
13_2_20cm_scaffold_5106_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(12965..13546)
DNA (582bp) protein (194aa)
Metal dependent phosphohydrolase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WTK7_KYRT2
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
metal dependent phosphohydrolase
13_2_20cm_scaffold_5106_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13933..14658
DNA (726bp) protein (242aa)
Transcriptional regulator, XRE family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRT4_KORVE
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABF40416.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter ver
Displaying 16 items

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