ggKbase home page

13_2_20cm_scaffold_5379

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_5379_1

Not on your lists

comp(2..2719)
DNA (2718bp) protein (906aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036A252A
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48749.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
AcrB/AcrD/AcrF family efflux transporter inner membrane protein
13_2_20cm_scaffold_5379_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2732..3874)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003630E8C
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
RND family efflux transporter MFP subunit
13_2_20cm_scaffold_5379_3

Not on your lists

comp(3879..5231)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036F59A5
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48751.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
outer membrane efflux protein
13_2_20cm_scaffold_5379_4
unknown

Not on your lists

comp(5228..5458)
DNA (231bp) protein (77aa)

This feature has no annotations

13_2_20cm_scaffold_5379_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

5553..7508
DNA (1956bp) protein (652aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037B0DF4
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABJ88746.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Sol
13_2_20cm_scaffold_5379_6
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7654..7809)
DNA (156bp) protein (52aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase rutE {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=859656 species="Bacteria; Proteobacteria; Betaproteobact
Putative NADH dehydrogenase/NAD(P)H nitroreductase RSIPO_01831 n=2 Tax=Ralstonia solanacearum RepID=B5SMK4_RALSL
rutE; oxidoreductase subunit of the alternative pyrimidine degradation pathway
13_2_20cm_scaffold_5379_7
unknown

Not on your lists

7958..8086
DNA (129bp) protein (43aa)

This feature has no annotations

13_2_20cm_scaffold_5379_8
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(8254..8700)
DNA (447bp) protein (149aa)
DoxX family protein id=2885630 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
DoxX family protein Tax=GWA1_Bdellovibrionales_52_35_curated
DoxX family protein
13_2_20cm_scaffold_5379_9
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8809..9324
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036DAF09
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEU35951.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis
13_2_20cm_scaffold_5379_10

Not on your lists

9552..9917
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003817969
Uncharacterized protein {ECO:0000313|EMBL:AFK79214.1}; TaxID=1191438 species="Bacteria; environmental samples.;" source="uncultured bacterium F42-01.;"
hypothetical protein
13_2_20cm_scaffold_5379_11
unknown

Not on your lists

10102..10215
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 11 items

View Taxonomy